Vescimonas coprocola: MM50RIKEN_13730
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Entry
MM50RIKEN_13730 CDS
T07634
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcop03032
]
MM50RIKEN_13730
03036 Chromosome and associated proteins [BR:
vcop03036
]
MM50RIKEN_13730
03400 DNA repair and recombination proteins [BR:
vcop03400
]
MM50RIKEN_13730
DNA replication proteins [BR:
vcop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MM50RIKEN_13730
Chromosome and associated proteins [BR:
vcop03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MM50RIKEN_13730
DNA repair and recombination proteins [BR:
vcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MM50RIKEN_13730
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BCK81610
UniProt:
A0A810Q0Y8
LinkDB
All DBs
Position
complement(1409356..1409631)
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AA seq
91 aa
AA seq
DB search
MNKTELVAVAAEKTALTKKDAEAVITAALDAIAEALRGGDDVRLVGFGTFGVRERAERTG
KNPRTGELVKIPAATIPTFKPGKALKDAVVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgagctggtcgccgtcgcggcagaaaagacggcactgaccaagaaggac
gcggaggccgtcatcacggcggctctggatgcaatcgctgaagccctgcggggcggcgat
gatgtgagactggtaggctttggcaccttcggtgtgcgggagcgtgctgagcgtactggc
aagaacccccgtaccggggagcttgtaaagatccctgcggccacgatccccaccttcaag
cccggtaaggctttgaaggatgccgtcgtaaagtaa
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