Vescimonas coprocola: MM50RIKEN_16220
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Entry
MM50RIKEN_16220 CDS
T07634
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcop03000
]
MM50RIKEN_16220
Transcription factors [BR:
vcop03000
]
Prokaryotic type
Helix-turn-helix
IclR family
MM50RIKEN_16220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_5
HTH_27
DUF4423
HTH_24
MarR
HTH_11
HTH_20
Rrf2
Motif
Other DBs
NCBI-ProteinID:
BCK81859
UniProt:
A0A810Q0K2
LinkDB
All DBs
Position
1660518..1661303
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AA seq
261 aa
AA seq
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MATTKTIQSVERAFSILEYLQQCGGGERSVKEIADALELNKSTAFGLINTLTTLGYLQQN
ADNQKYVLSLKLLSFSNTIKVQNSIIRTVHPYLEQISLKYGEIAHCGVAQGDSVIYVDKV
ESSRSLSINTQIGTKNYLHCTGVGKCILAYMPEDEQQHILAGPLKALTFNTIVDPRQLQV
ELRHIRADGYAMDNEEVEVGLSCVAVPVFSAPGQVSCSISISGMTPRVRTALRGGLLDDL
RQASADISRSLYGYQPADDLL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacaaaaaccatccagtcggtggagcgggccttctccattctggaatacctt
caacagtgcggtggcggagagcgcagcgtcaaggagatcgctgatgcactggagctgaac
aagagtaccgccttcggcctcatcaacaccctgaccacgctgggctacctgcagcagaac
gcagataaccagaagtatgtgctgagcctgaagctgctgagcttctccaacaccatcaag
gtccagaacagcatcatccgcaccgtccacccctatctggagcagatcagcctgaaatac
ggcgagatcgcccactgcggcgtggctcaaggggacagcgtcatctatgtggacaaggtg
gagtccagccggtcgctgtctatcaacacccagatcggcaccaagaactacctccactgc
accggcgtgggcaagtgtattctggcctatatgccggaggatgagcagcagcacatcctc
gccggaccgctgaaggcactgaccttcaacaccattgtggacccccgtcagcttcaggtg
gagctgcggcacatccgggccgacggctacgccatggacaacgaggaggtggaggtgggt
ctgtcctgcgtggcagtgccggtgttctccgcaccggggcaggtctcctgctccatcagc
atctccggcatgaccccccgtgtccgcaccgccctgcggggtggactgctggacgatctg
aggcaggcctccgccgacatctcccgcagtctttacggctatcagcccgccgatgacctc
ctgtaa
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