Vescimonas coprocola: MM50RIKEN_16370
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Entry
MM50RIKEN_16370 CDS
T07634
Symbol
lcfA
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop00061
Fatty acid biosynthesis
vcop00071
Fatty acid degradation
vcop01100
Metabolic pathways
vcop01212
Fatty acid metabolism
vcop02024
Quorum sensing
Module
vcop_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MM50RIKEN_16370 (lcfA)
00071 Fatty acid degradation
MM50RIKEN_16370 (lcfA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MM50RIKEN_16370 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vcop01004
]
MM50RIKEN_16370 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcop04147
]
MM50RIKEN_16370 (lcfA)
Enzymes [BR:
vcop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MM50RIKEN_16370 (lcfA)
Lipid biosynthesis proteins [BR:
vcop01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
MM50RIKEN_16370 (lcfA)
Exosome [BR:
vcop04147
]
Exosomal proteins
Exosomal proteins of breast milk
MM50RIKEN_16370 (lcfA)
Exosomal proteins of breast cancer cells
MM50RIKEN_16370 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BCK81874
UniProt:
A0A810Q1P5
LinkDB
All DBs
Position
1677344..1679269
Genome browser
AA seq
641 aa
AA seq
DB search
MSETVQIKTPWLASKDPEVPSTLNYSTLSMCGRVEEMVRQYPNYIAYEFMGKTTTYAEMW
QKINACAKSLKAIGIREGDKVTICMPNAPQTLCMFYAVNMVGAIANMVHPLSAESEISFY
LRDSNSVAAITLDQFYPKFESVRKTVDLPCLIVTSVADELKPLLRVGYQLTEGRKNPKVP
RGPGVVLWKDFLKRGEHVEIYRIKRKDTDPAAILYSGGTTGVTKGILLSNRNFNALAAQI
VATNPFFHPGHKMLAIMPMFHGFGLGVSIHSMVANGGHCILIPRFTPQSYAELIKKHKPN
LIAGVPSLFEALLRVKEIEGADLSCLKGVFSGGDSLSIELKKRFDKFLHDHGATVSVREG
YGTTECVTASCLTPIHKQKEGSIGIPFPDTYYKIVKPGTQEEVPYGEEGEICLSGPTVML
EYVNHPEETAQTKQTHADGLTWIHTGDLGMMDEEGFIYFRQRIKRMIVTNGYNVYPSQLE
NILDGHDYVHLSCVIGVKDPIKMQRVKAFVVLKPGYQPTEACKKELLDYCRKHIAKYAMP
SDIEFREELPKTLVGKVAYRVLEEEENAKQAQKAVEDAKRAEEDAKRAEAAKAEKLSAAK
KPAAKKPAPKKPAHPTAKPEPAKQAQKADTPHDGQNNDIKE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagacggtacagatcaagaccccgtggctggcatccaaggatcccgaggtgccc
tctaccctgaactactccaccctgtccatgtgcggccgggtcgaggagatggtacgtcag
taccccaattacatcgcctatgagttcatgggcaaaaccaccacctacgccgagatgtgg
cagaagatcaacgcctgtgccaagagcctgaaggccatcggcatccgggaaggcgacaag
gtcaccatctgtatgcccaacgcccctcagaccctgtgtatgttctacgccgtgaacatg
gtgggcgccatcgccaacatggtccaccctctgtccgccgagagcgagatctccttctat
ctgcgggactccaactccgtggcggccatcacgctggatcagttctaccccaagtttgaa
agcgtccgcaagacggtagatctgccctgcctcatcgtcacctccgtggccgatgagctc
aagcccctgctgcgggtgggctatcagctcaccgagggccgcaagaaccccaaggtcccc
cgtggccccggcgtggtgctgtggaaggatttccttaagcgtggcgagcacgtggagatc
taccgcatcaagcgcaaggacaccgatcccgctgccatcctctactccggcggcaccacc
ggcgtcaccaagggcatcctgctctccaaccgcaactttaacgctctggccgcccagatc
gtggccaccaaccccttcttccatccgggtcacaagatgctggccatcatgcccatgttc
cacggcttcggactgggcgtgtccatccactccatggtggccaacggcggtcactgcatc
ctgatcccccgcttcacccctcagagctacgccgagctcatcaaaaagcacaagcccaat
ctcatcgccggcgtcccctccctgttcgaggcgctgctgcgggtcaaggagatcgaaggc
gccgacctcagctgcctgaagggtgtgttctccggcggtgacagtctgtccattgagctg
aagaagcgctttgacaagttcctccacgaccacggcgccaccgtcagcgtccgggagggc
tacggcaccaccgagtgcgtcaccgccagctgcctgacccccatccacaagcagaaggag
ggctccatcggcatccccttcccggacacctattacaagatcgtcaagcccggcactcag
gaggaggtcccctacggtgaggagggcgagatctgcctgtccggccccaccgtgatgctg
gagtacgtcaaccatccggaggagacggcccagaccaagcagacccacgccgacggcctt
acctggatccacaccggcgacctgggcatgatggacgaggagggctttatctacttccgt
cagcgcatcaagcgcatgatcgtcaccaacggctacaacgtctatccctcccagttggag
aatattctggatggccacgactacgtccacctcagctgcgtcatcggcgtcaaggacccc
atcaagatgcagcgggtcaaggcattcgtggtgctcaagcccggctatcagcccacggag
gcctgcaagaaggagctgctggactactgccgcaagcacatcgccaagtacgccatgccc
tccgacatcgagttccgtgaggagctgcccaagacactggtgggcaaggtggcctaccgt
gtgctggaggaggaagagaacgccaagcaggctcagaaggccgtagaggacgctaagcgt
gccgaggaggatgccaagcgggccgaggcggcgaaggctgagaagctcagtgccgccaag
aagcctgcggccaaaaagcccgcccctaagaagcccgctcaccccacggccaagcccgag
cccgccaagcaggctcagaaggccgacacccctcatgacggccagaacaacgacatcaaa
gaatag
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