Vescimonas coprocola: MM50RIKEN_17620
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Entry
MM50RIKEN_17620 CDS
T07634
Name
(GenBank) Na+/H+ antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcop02000
]
MM50RIKEN_17620
01504 Antimicrobial resistance genes [BR:
vcop01504
]
MM50RIKEN_17620
Transporters [BR:
vcop02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
MM50RIKEN_17620
Antimicrobial resistance genes [BR:
vcop01504
]
Gene variants
Tetracycline resistance genes
Transporters
MM50RIKEN_17620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
DUF7472
Motif
Other DBs
NCBI-ProteinID:
BCK81999
UniProt:
A0A810Q0Y7
LinkDB
All DBs
Position
complement(1812274..1814010)
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AA seq
578 aa
AA seq
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MEKKRTKIAYFTAVGVFLVLLVVLGLTYRETPLPTLEVEGEPVLADTPFAGTFWSLLPPI
VAIVLALISKEVYSSLFLGCLVGALLYAQFAPWDTIVALVGADYGIVSVLADSGNMGIIV
FLVTLGIMVDLMNKGGGSEAFGRWASKTVKTRCAAQLLTMLLGVLIFIDDYFNCLTVGAV
MRPVTESHKISRAKLAYLIDATAAPVCMIAPVSSWAAAVSGYVQSDAVNGIEMFIKQIPW
NYYCLLTLVMIVVLSVMNIDYGSMLTHEYNAQVKDDLFTTPERPFEGADDYEKPARGRSS
VLDLLLPVVALIVVCIVSLIWSGGYYDGESEYFHDFVGAFSNSSSGMALALGGLMGMLFT
VVYFWLRGAISFEKSMESVPQGFIQMIAPILILTFAWTLCSFTRFGMYSAVFVKNAMAGA
GDLKVFLPAVIFLIGCAIGFATGTSWGTIGIMAPIVVSVFNYDVEPVLCTIGLAAACSGG
VMGDHCSPISDTTIMASAGAHCFHLNHVFTQLPYALTASGVAFVSFIIAGLVQSVWLCLA
IAVALMIGTLLVIRAIVSRRHAGIFQEMAQASQQLLHR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaacgcacaaaaatcgcatactttacagccgtcggtgtattcctcgttttg
ctggtggtgctgggccttacataccgggagacgcccctgcccacgctggaggtagagggg
gagccggtgctggccgacacgccctttgccggtaccttctggtccctgctgccgcccatc
gtggccatcgtgctggccctgatcagtaaggaggtctactcgtccctgtttctggggtgt
ttggtgggcgctctgctgtacgcccagtttgccccatgggacaccattgtggcgctggta
ggcgcagactacggcatcgtctccgtactggccgacagcggcaacatgggcatcatcgtc
tttctggtgacgctgggcatcatggtggatctgatgaacaagggcggcggatcggaggcc
ttcggacgctgggcctccaagaccgtaaagacccggtgcgccgcacagctgctgaccatg
ctgctgggtgtgctgatcttcatcgacgactacttcaactgcctgacggtgggcgctgtg
atgcggcccgtcaccgagagccacaagatttcccgtgccaagctggcctacctcatcgac
gccacggcggccccggtgtgcatgatcgccccagtgtcctcgtgggcggcggcggtatcc
ggctatgtacagtccgacgccgtcaacggcatcgagatgttcatcaagcagatcccgtgg
aactactactgtctactgacgttggtgatgatcgtggtgctgtcggtgatgaacatcgac
tacggctccatgctgacccatgagtataacgctcaggtgaaggacgatctctttaccacg
ccggagcgcccctttgagggggccgacgactatgaaaagcccgcccgtggccgctcctct
gtgctggatctgctgctgccggtggtggcgctgatcgtggtgtgcatcgtgtccctgatc
tggtccggcggctactatgacggcgagagcgagtacttccacgacttcgtgggggccttc
tccaactcctcctccggcatggcgctggccttgggtggccttatggggatgctgttcacg
gtggtgtacttctggctgcggggggccatctcctttgaaaagtctatggagtctgtgccg
cagggctttatccagatgatcgctcccatcctcattctgacctttgcatggaccctgtgc
tctttcacccgcttcgggatgtactccgccgtgttcgtgaagaacgccatggcaggggcc
ggggatctgaaggtgttcctgccggcggtgatcttcctcatcggctgcgccatcggcttt
gccaccggcacctcctgggggaccatcggcatcatggcccctatcgtggtgtccgtgttc
aactacgacgtggagccggtgctgtgtaccatcggtttggcggcagcctgctccggcggc
gttatgggcgaccactgctcgcccatttccgacaccaccatcatggcctcggcgggcgct
cactgcttccacctgaaccatgtgttcacccagttgccctatgccctcaccgcctccggt
gtggccttcgtcagcttcatcatcgcaggactcgtgcagtcggtgtggctgtgtctggcc
attgccgtggcgctgatgatcggcacactgctggtgatccgggccattgtgtcccgccgt
cacgcaggtatcttccaggagatggcacaggccagtcagcagctgctgcaccgctga
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