Vescimonas coprocola: MM50RIKEN_18960
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Entry
MM50RIKEN_18960 CDS
T07634
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcop03016
]
MM50RIKEN_18960 (miaB)
Enzymes [BR:
vcop01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
MM50RIKEN_18960 (miaB)
Transfer RNA biogenesis [BR:
vcop03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
MM50RIKEN_18960 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BCK82133
UniProt:
A0A810QC69
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All DBs
Position
1931088..1932500
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AA seq
470 aa
AA seq
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MDRKTVLLDEAQLERQREYTRQLAALHQQRGKPVYALVDTFGCQQNVADSQHILGMLRDM
GCQFTDDAAQADIVVLNTCAIRDHAEKRVYGNLGALTHTKKQNPEQVICLCGCMAQRPEV
AEKVRQSYRHVDLVFGPQALWKFPELLYRVYTRRGRVFSVEDEHGTIAEGMPVVREGNVR
AWVSIMYGCNNFCSYCIVPYVRGRERSREPQCIIDDVRQLAAEGYKEITLLGQNVNSYGK
DLETPWDFADLLRELDKIEGDYLIRFMSSQPKDATPKLFDTMARSRHVAHQLHLPVQSGC
DRVLRAMNRPYDRAKYLELITYARKVMPDLVLTSDVIIGFPGETEAEAMETVELVRQVEF
DALFTFIFSPRPGTPAAKMDDPVPRSEKQKWFDTLCAVQNDISARLHARYVGQTLRVLVD
GRTDDARWPLSARTAGGRLVHLVGDEDALGQYRQVRITDSNTWALFGEMV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
ttggatagaaaaacagttcttctggacgaagcgcagctggagcggcagcgggagtatacc
cgccagctggcggccctccatcagcagcggggcaagcccgtctatgcgctggtggacacc
ttcggctgccagcagaatgtggccgacagccagcacattctgggtatgctgcgggacatg
ggctgccagttcaccgacgacgccgctcaggcggatatcgtggtgctgaatacctgcgcc
atccgggatcacgccgaaaagcgggtctacggcaatctgggggcgttgacccacacgaaa
aagcagaacccggagcaggtcatctgcctgtgcggatgcatggcccagcggccggaggtg
gcggagaaggtgcgccagagctatcgccacgtggatctggtgttcgggccgcaggcgctg
tggaagttcccggagcttctgtaccgggtctatacccggcgggggcgtgtgttctccgtg
gaggatgaacacggcaccatcgccgaggggatgcccgtggtgcgggaaggcaatgtccgg
gcttgggtgtccatcatgtacgggtgcaacaacttctgctcatactgcatcgtcccctac
gtccggggccgggagcgcagccgtgagccccagtgcatcatcgatgacgtgcggcagctg
gccgccgaggggtataaggaaatcactctgctggggcagaacgtcaactcctacggcaag
gatctggagacgccgtgggactttgccgacctcctgcgggagctggacaaaatcgagggg
gactatctgatccggttcatgtcctcccagcccaaggacgccacccccaagctgtttgac
accatggcccggagcaggcacgtggcccaccagctgcacctgccggtgcagtccggctgc
gaccgggtgctgcgggccatgaaccggccctatgaccgggccaagtatctggagctcatc
acctatgcccggaaggtcatgcccgatctggtgctgacctcggatgtcatcatcggcttc
cccggcgagacggaggcggaggctatggagacggtggagctggtgcggcaggtggaattc
gacgccctgttcaccttcatcttctctccccggcccggtacgccggcggccaaaatggac
gatcccgtcccccgcagcgagaagcagaagtggttcgacactctctgcgccgtgcagaac
gatatctccgcccggctccacgcccgatatgtgggccagaccctgcgtgtgctggtggac
ggccgcaccgacgacgcgcgctggcccctatccgcccggacggcgggaggacggctggta
catctggtgggcgacgaggacgctctgggccagtaccggcaggtacgcatcaccgacagc
aacacctgggcgctgttcggggagatggtatga
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