Vescimonas coprocola: MM50RIKEN_19150
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Entry
MM50RIKEN_19150 CDS
T07634
Symbol
rocR_1
Name
(GenBank) arginine utilization regulatory protein
KO
K06714
arginine utilization regulatory protein
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcop03000
]
MM50RIKEN_19150 (rocR_1)
Transcription factors [BR:
vcop03000
]
Prokaryotic type
Helix-turn-helix
Other families
MM50RIKEN_19150 (rocR_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
PAS_4
AAA
MCM
PAS_9
AAA_16
AAA_7
GAF_2
AAA_2
HTH_50
bpMoxR
HTH_30
DUF815
PAS
AAA_3
XAP5
AIG1
Motif
Other DBs
NCBI-ProteinID:
BCK82152
UniProt:
A0A810Q7A4
LinkDB
All DBs
Position
1953916..1955289
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AA seq
457 aa
AA seq
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MNKNFEQMLRLVDYVDGLMVVDKNCIIRHYYTAYPDLVNLRQDEPLNRSLFEIYPTLKRE
DSYICRALKTGESFINYEQTYINYKGDAMEANCSAVPIKEHGEVVGVIDMVIYKDAHVTE
RRLSFDISLISALTKSYNTSDQSLEDIVTQDGEMIRIKEKILQTADSDAHVLVYGKTGTG
KELIVNAIQKTSRRKDAPFIKQNCASIPSTLLESILFGTTKGSYTGAKDTPGLFELADGG
TLFLDEINSMELTAQAKLLRVLEDNCIRRIGAKEEKQVNVRIIAAVNEDPEGCVERNKIR
EDIFYRLCVLRYDIPELYRRKGDIPLLMEYFRKHYNKKFHKQIMAYSSEVQDIFLAYNWP
GNVRELKNVIESAFHNNHTAILTRNDIPNYILSRLAVDTMHAEDVRGLPLHEMLARYEVL
LIEDAYRRNGGSLTKTAAELQVSKQNLAYKMKKYDIR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaactttgaacaaatgctccgtctggtggactatgtggacggcctgatggtg
gtggacaaaaactgcatcatccgccactactacaccgcctatcccgatctggtaaacctg
cggcaggacgagcctctgaaccgcagtctctttgaaatttatcccaccctgaagcgggag
gacagctacatctgccgggcgctgaaaacaggagagagcttcatcaactacgagcagacc
tatatcaactacaagggggacgccatggaggccaactgcagcgccgtccccattaaggag
cacggcgaagtggtgggcgtcatcgatatggtcatctacaaggatgcccacgtcaccgag
cggcggctaagcttcgacatcagcctcatcagcgccctcaccaaaagctacaacacctcc
gaccagtcgctggaggacatcgtcacgcaggatggcgagatgatccgcatcaaggagaag
atcttgcagaccgccgacagcgatgcccatgtgctggtctatggcaagaccggcaccgga
aaggagctcattgtcaacgccatccagaaaaccagccgccgcaaggatgcccccttcatc
aagcagaactgcgcctccatccccagtactctgctggagagcatcctcttcggcaccacc
aagggcagctacaccggggctaaggatacgccgggtctgttcgagctggccgacggcggc
acgctgttcctcgacgagatcaactccatggagctgacggcgcaggccaagctgctgcgg
gtgctggaggacaactgcatccgccgcatcggtgccaaggaggaaaagcaggtgaacgtg
cggatcatcgccgccgtcaacgaggacccggagggctgcgtagagcggaataagatccgg
gaggatatcttctaccgcctgtgtgtgctgcggtacgatatcccggagttgtaccggcgg
aagggggatatccccctgctgatggaatatttccgcaagcactacaacaagaaattccac
aagcagatcatggcatacagcagcgaggtacaggatatctttctggcctataactggccc
ggcaacgtccgggagctgaaaaacgtcatcgaatccgccttccacaacaatcacaccgcc
atcctcacccgcaacgatatccccaactacatcctctcccggctggcggtggacaccatg
cacgccgaggacgtccgaggcctgcccctccacgagatgctggctcggtacgaggtcctc
ctcatcgaggacgcctaccgccgcaacggcggcagcctcaccaaaacggcggcggagctg
caggtcagcaagcagaacctcgcctataaaatgaaaaagtacgatatccggtga
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