Vescimonas coprocola: MM50RIKEN_22040
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Entry
MM50RIKEN_22040 CDS
T07634
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcop03032
]
MM50RIKEN_22040 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
vcop03400
]
MM50RIKEN_22040 (gyrA_1)
Enzymes [BR:
vcop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MM50RIKEN_22040 (gyrA_1)
DNA replication proteins [BR:
vcop03032
]
Prokaryotic type
DNA Topoisomerases
MM50RIKEN_22040 (gyrA_1)
DNA repair and recombination proteins [BR:
vcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MM50RIKEN_22040 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BCK82441
UniProt:
A0A810QA67
LinkDB
All DBs
Position
complement(2275659..2278151)
Genome browser
AA seq
830 aa
AA seq
DB search
MSKKPQYDPEEIRFPDQHIVERSLVPEMEKSYIEYAMSVIVGRALPDVRDGLKPVHRRIL
YAMYEDNLTSDRPFKKSATCVGDVLGRYHPHGDASVYDALVRLAQDFSMRYMLVDGHGNF
GSVDGDPPAAYRYTEARLSKISNEMLRDIRKDTVDWDPNFDESRKEPRVLPSRFPNLLVN
GSSGIAVGMATNIPPHNLREVIGACIHVLDDPDATLADLMTYIKGPDFPTRGLIMGRSGI
RAAYATGRGRVVMRARHEFEGFGHDRTRIIITELPYQVNKRMLIKSMADQVEDKRLEGIS
DIRDETDRNGMRIVIELKRDANPQVVLNRLFAQTQLQTTFAINMLALVNNQSQPKILSLR
HIIDEYLAFQEEIIVRRTRYDLKDAQARAHLLEGLLIAQDNIDEVIHIIRTSYDNAKENL
MSRFGLDDVQAQAILDMRLKALQGLDREKLQAEYKELEEKIAYFLKVLSDDALVRSILKE
ELSAIAEKYGDDRKTEIQDVEDEIDIEDLIEEEECVFTLTENGYIKRTAVSEYAAQSKGG
MGKKGITTRDEDTVVDVFTASTHDYLLFFTDTGKVYRKKGYQIPESGKTARGTNIVNILQ
VEQGERIQTMLHYREAGEGQLYLFMTTRNGTVKRLPVETLKNLRNNGIRALTLDEGDELI
NVQETDGSQRILIATHDGQAVCFDETDVRAMGRTAVGVRGIRLREGDYVVGAARAEAGKT
VLSITERGYGKRTPVEEYRITSRGGLGIRNYMVTEKTGSIVGIKVVDGQEDLLLMTQAGI
LIRTAVDSIRIAGRATQGVIVMRFKEEGDHVISMALADRETEKETAPAEE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaaccccaatacgatcctgaggagatccgcttcccggaccagcacatcgtc
gagcgctcgctggtgccggagatggagaagtcctacatcgaatacgccatgtccgttatc
gtgggccgggcgctgcccgacgtgcgggacggcctgaagcctgtccaccggcgtattctc
tacgccatgtacgaggacaacctcaccagcgaccgcccctttaagaagtccgccacctgc
gtgggcgacgtgctgggccggtatcacccccacggcgacgcctccgtctacgacgctctg
gtgcgtctggcacaggatttctccatgcgttatatgctggtggacggccacggcaacttc
ggttccgtggatggcgatccccccgctgcctaccgttacacggaggcccgtctttctaaa
atttccaatgaaatgctgcgggatatccggaaggacaccgtggactgggaccccaacttt
gacgagagccgcaaggaaccccgtgtgctgcccagccgcttccccaatctgctggtcaac
ggctcctccggtatcgccgtgggtatggccaccaatatcccaccccacaacctgcgggag
gtcatcggagcctgtatccacgtgctggatgatcccgatgccacgctggcggatctgatg
acctatatcaagggtcccgacttccccacccgtggcctcatcatgggccgcagcggcatc
cgtgccgcctacgccaccggccgtggccgggtggtgatgcgggcccgccacgagttcgag
gggttcggccacgaccgcacccgtatcatcatcacggagctgccgtatcaggtgaataag
cggatgctcatcaagagcatggccgatcaggtggaggacaagcgtctggagggcatctcc
gacatccgggacgagacggaccgcaacggtatgcggatcgtcatcgagctgaagcgggac
gccaatccgcaggtggtactcaaccgcctgtttgcacagacccagctgcaaaccaccttc
gccatcaatatgctggcgctggtgaataaccagtcccagccgaagatcctctccctgcgc
cacatcatcgacgaatatctggcctttcaggaggagatcatcgtccgccgcacccgctat
gacctaaaggacgcacaggcccgtgctcacctgctggagggtctgctcatcgcacaggac
aacatcgacgaggtcatccacatcatccgcaccagctacgacaacgccaaggagaacctt
atgtcccgcttcgggctggacgatgtgcaggcacaggccattctggatatgcgcctgaag
gcgctgcaggggctggatcgtgagaagctgcaggcggagtacaaggagctggaggagaag
atcgcctacttcctgaaggtgctgtccgacgacgctctggtgcgctccatcctgaaggag
gaactgtccgccattgccgagaagtacggcgacgaccgcaagacggaaattcaggacgtg
gaggacgagatcgacatcgaggacctcattgaggaggaggagtgcgtctttaccctgacg
gagaacggctacatcaagcgcaccgccgtcagtgagtacgccgcccagagcaagggcggc
atgggtaagaagggcatcaccacccgtgacgaggacaccgtggtggatgtgttcaccgcc
tccacccacgactatctcctgttctttaccgataccggcaaggtctaccgcaagaagggc
taccagatcccggagagcggcaagaccgccagaggcaccaacatcgtcaacatcctgcag
gtggagcagggggagaggatccagaccatgctccactaccgggaggccggggagggccag
ctgtacctcttcatgaccacccgcaacggtacggtgaagcgtctgccggtggagacgctg
aagaatctccgcaacaacggcatccgggccttgacgctggacgagggcgacgagcttatc
aacgtgcaggagaccgacggcagccagcgcatcctcattgccacccacgacggtcaggcg
gtgtgcttcgacgagacggacgtgcgtgccatgggccgcaccgccgtgggcgtccggggc
atccgcctgcgggagggcgactatgtggtgggcgccgccagagccgaggccggcaagacg
gtgctctccatcacggagcgtggctacggcaagcgcaccccggtggaggagtaccgcatc
accagccgtggcggtctcggtatccgcaactatatggtcacggaaaagaccggatccatt
gtgggcatcaaggtggtggacgggcaggaggatctgctgctgatgacgcaggcgggtatc
ctgatccgcacggcggtagacagcatccgcatcgccggccgggccacgcagggcgttatc
gtcatgcgctttaaggaggagggcgaccacgtcatctccatggcgctggcggaccgggag
acggagaaggaaaccgccccggcagaggaataa
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