Vescimonas coprocola: MM50RIKEN_22170
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Entry
MM50RIKEN_22170 CDS
T07634
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MM50RIKEN_22170 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcop03019
]
MM50RIKEN_22170 (pnp)
03016 Transfer RNA biogenesis [BR:
vcop03016
]
MM50RIKEN_22170 (pnp)
Enzymes [BR:
vcop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MM50RIKEN_22170 (pnp)
Messenger RNA biogenesis [BR:
vcop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MM50RIKEN_22170 (pnp)
Transfer RNA biogenesis [BR:
vcop03016
]
Prokaryotic type
tRNA degradation factors
MM50RIKEN_22170 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
SPATA25
Motif
Other DBs
NCBI-ProteinID:
BCK82454
UniProt:
A0A810Q388
LinkDB
All DBs
Position
complement(2288418..2290568)
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AA seq
716 aa
AA seq
DB search
MSTIITKRQFPNYHKYTMELAGRPLTLEVGKLAELANAAVMVTYGETSVLCCVTAAARPR
DGIDFFPLSVDFEEKLYSVGRIPGSFNRREGRPGEKGILTSRVIDRPIRPLFPSDFRNDV
SVMCTVMSMDHDCSAEIAALIGTSAALAISDIPWNGPVGALKVGLVDGELVLNPNSEQRK
VSDLDVTVVSTGKKVVMIEAGANQVDNDTMYRAIQLAHQENQKQVALINQMVSEIGKPKF
DYPHADFNQELFDKIVHDFMDEAKAAMDTDDKNVREARWNEMIQHWHEKYLEEYPDMDQY
LEEFTYKFQKKIVKAWLLEGHRVDGRQKNEIRPLSAEVGVLPRVHGSGLFTRGQTQVLSV
ATLDTLSACQKLDTIWEETEKRYMHHYNFPGYSVGEAKPARSPGRREIGHGALAERALLP
VIPPVEEFPYAIRVVSEVVSSNGSTSQGSICGSTLALMDAGVPISAPVAGISCGLIQDDD
GSFTTFIDIQGVEDFHGEMDFKVAGTKKGITAIQMDLKNDGLTMEIIRNALDITYDARCQ
ILDQIMLPCIAEPRPEVSKYAPKMLTMHIDPDRIREVIGKGGSVIQKIVAESGAKIDIDD
DGTIHIASPDAESCAIAKKCIDDIVFVPEVGKLYYGRVVRLMTFGAFVEIAPGKDGLVHI
SKLADKRIEKVEDACKVGDMMWVKFMEIDEKGRWNLSHKDAMKEIRAKEAAGEKIQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccattatcaccaagcgccaattccccaactaccacaagtataccatggagctg
gcgggccgtcctctgacgctggaggtcgggaagctggccgagctggccaacgccgccgtc
atggtcacctatggcgagaccagcgtgctgtgctgcgtcaccgctgccgcccgtccccgt
gacggcatcgacttcttccccctgagcgtggacttcgaagagaagctgtactccgtgggc
cgcatccccggcagcttcaaccgccgtgagggccgccccggcgagaagggcatcctcacc
agccgtgtcatcgaccggcccatccgacccctgttcccctccgatttccgcaacgacgtg
tccgtcatgtgtaccgtcatgagcatggaccacgactgctccgcagagatcgccgccctc
atcggcacctccgccgctctggccatctccgatatcccctggaacggccctgtgggcgct
ctgaaggtgggtctggtggatggtgagctggtgctcaaccccaacagtgagcagcgcaag
gtcagcgatctggatgtcaccgtggtctccaccggcaagaaggtggtgatgatcgaggcc
ggcgccaatcaggtggataacgacaccatgtaccgtgccatccagctggcccatcaggag
aaccagaagcaggtggccctcatcaaccagatggtctccgagatcggcaagcccaagttt
gactatccccacgccgacttcaatcaggagctgttcgacaagatcgtccacgacttcatg
gacgaggccaaagctgccatggacaccgacgacaagaacgtccgtgaggcccgctggaat
gagatgatccagcactggcatgagaaatatctggaggagtatccggatatggatcagtat
ctggaggagttcacctacaagttccagaagaagatcgtcaaagcatggctgctggagggc
caccgtgtggatggccgccagaagaacgaaattcgtcccctgtccgccgaggtgggcgtg
ctgccccgtgtccacggctccggcctgttcacccgcggccagacgcaggtgctgtccgtg
gcgacgctggacaccctttccgcctgccagaagctggataccatctgggaggagacggag
aagcggtatatgcaccactacaacttccccggctactccgtgggcgaggccaagcccgcc
cgcagccccggccgtcgtgagatcggccacggcgctctggcggagcgggccctgctgcct
gtgatccccccggtggaggagttcccctatgccatccgtgtggtgtctgaggtggtatcc
tccaacggctccacctctcagggctccatctgtggctctacgctggctctgatggatgcc
ggtgtacccatctccgcccctgtggccggtatttcctgcggtctgatccaagacgacgac
ggctccttcaccactttcatcgacattcagggcgtggaggacttccacggcgagatggac
ttcaaggtggccggcaccaagaagggcatcaccgccattcagatggacctgaagaacgac
ggcctgaccatggagatcatccgcaacgctctggacatcacctacgatgcccggtgccag
atcttggatcagatcatgctgccctgcattgccgagccccggcctgaggtcagcaagtac
gcccccaagatgctcaccatgcacatcgatcctgaccgcatccgtgaggtcatcggcaag
ggcggcagcgtcattcagaagatcgtggccgagtccggcgccaagatcgacatcgacgac
gacggcaccatccacattgcctctcccgacgccgagagctgcgccatcgccaagaagtgc
atcgatgacatcgtctttgtaccggaggtgggcaagctgtactacggccgtgtcgtgcgc
ctgatgaccttcggtgccttcgtggagatcgctcccggcaaggatggtctggtgcatatc
tccaagctggccgacaagcgcatcgagaaggtggaggacgcctgcaaggtgggcgacatg
atgtgggtcaagttcatggagatcgacgagaagggccgctggaacctgtctcacaaggat
gccatgaaggagatccgggccaaggaggccgccggggagaagatccagtaa
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