KEGG   Vescimonas coprocola: MM50RIKEN_23480
Entry
MM50RIKEN_23480   CDS       T07634                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vcop  Vescimonas coprocola
Pathway
vcop00010  Glycolysis / Gluconeogenesis
vcop00020  Citrate cycle (TCA cycle)
vcop00260  Glycine, serine and threonine metabolism
vcop00280  Valine, leucine and isoleucine degradation
vcop00310  Lysine degradation
vcop00380  Tryptophan metabolism
vcop00620  Pyruvate metabolism
vcop00630  Glyoxylate and dicarboxylate metabolism
vcop00640  Propanoate metabolism
vcop00670  One carbon pool by folate
vcop00785  Lipoic acid metabolism
vcop01100  Metabolic pathways
vcop01110  Biosynthesis of secondary metabolites
vcop01120  Microbial metabolism in diverse environments
vcop01200  Carbon metabolism
vcop01210  2-Oxocarboxylic acid metabolism
vcop01240  Biosynthesis of cofactors
Module
vcop_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:vcop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MM50RIKEN_23480 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MM50RIKEN_23480 (lpdA)
   00620 Pyruvate metabolism
    MM50RIKEN_23480 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MM50RIKEN_23480 (lpdA)
   00640 Propanoate metabolism
    MM50RIKEN_23480 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MM50RIKEN_23480 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MM50RIKEN_23480 (lpdA)
   00310 Lysine degradation
    MM50RIKEN_23480 (lpdA)
   00380 Tryptophan metabolism
    MM50RIKEN_23480 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MM50RIKEN_23480 (lpdA)
   00670 One carbon pool by folate
    MM50RIKEN_23480 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcop04147]
    MM50RIKEN_23480 (lpdA)
Enzymes [BR:vcop01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MM50RIKEN_23480 (lpdA)
Exosome [BR:vcop04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MM50RIKEN_23480 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA FAD_binding_2 NAD_binding_8 HI0933_like DAO AlaDh_PNT_C Lycopene_cycl FAD_binding_3 Thi4 3HCDH_N Lys_Orn_oxgnase
Other DBs
NCBI-ProteinID: BCK82585
UniProt: A0A810Q7H8
LinkDB
Position
complement(2439102..2440466)
AA seq 454 aa
MFDLLVIGAGPGGYTAAARAAKLGLSTAIVEERSWGGTCLNRGCVPTKTLLHASEVYRSA
ADGAAIGIHAEGLRADIPEIFAYKERISRQLCGGVESLLKGAGVTLLRGRAVITAPGSVR
VTGEDGGDYEARRILIATGSVPVRPPIPGLELAMTSDELLEGTDHLYRSIVIIGGGVIGV
EFATFYSDLGCSVTLLEGMDRLLPNMDRELGQNLALILKKQGVQVCTRSMVDRLEQTPEG
IAVHYTAKETPGCAVGEAVLCAIGRRAFRDGLFAQGLTPETNGHGLWVDEHYQTSIPGVY
AIGDVSSPVQLAHVAAAQGAACVEHMAGLSAGVCMDAVPSCIYCRPEIAAVGLTEAEAKE
RGIPVKTGKCVMGGNARTVIADPGRCFMKVTAHAETGAILGAQLMCPNASDIIGQLGQAI
ANGMTPGQLLAAMRPHPTYEEALSEALESLAGKL
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgtttgatctgctggtcatcggggcgggccccggtggctataccgccgccgcacgggcg
gccaagctgggactttccaccgccatcgtggaggagcgcagctggggcggcacctgcctg
aaccgggggtgcgtccccaccaaaacgctgctccatgcttcggaggtctaccgcagcgcc
gcagacggcgccgccatcggcatccacgcagagggtctgcgggcggacatcccggagatc
ttcgcctataaagagcgcatctcccgccagctgtgcggcggggtggagagccttctgaag
ggcgcaggcgtgacgctgctgcggggccgggccgtcatcacggcgccgggaagcgtccgt
gtcaccggcgaggacggcggcgactatgaggcccggcgcatcctcatcgccaccggctcc
gtgccggtgcggccccccattccggggctggagctggccatgacctccgatgaactgctg
gaggggacggatcacctgtaccgctccatcgtcatcatcggcgggggcgtcatcggcgtg
gagtttgccacgttttacagcgatctggggtgcagcgtcaccctgctggagggcatggac
cggctgctgcccaatatggatcgggagctgggccagaatctggcgctgatcctgaaaaag
caaggggtgcaagtctgtacccgctccatggtggatcgtctggagcagacaccggagggg
atcgccgtccactacaccgccaaggagacccccggctgcgccgtgggggaggcggtgctg
tgcgccatcggccgcagggccttccgggatggactgtttgcccagggactgacgccggag
accaatggccacggtctgtgggtggatgagcactaccaaaccagcatccccggcgtatac
gccatcggggatgtgtcctccccggtgcagctggcccatgtggcggcagcacagggggca
gcctgcgtggagcacatggcggggctgtccgccggggtgtgcatggacgccgtacccagc
tgcatctactgccggccggagatcgccgccgtgggactgacggaggcggaggccaaggag
cggggcatccccgtcaagaccggcaagtgcgtcatgggcggcaacgcccggaccgtgatc
gcagaccccggccggtgcttcatgaaggtcacggcccacgccgagaccggggctattttg
ggggcgcagctgatgtgtcccaacgccagcgacatcatcgggcagctggggcaggccatt
gccaacggcatgacaccggggcagctgctggccgccatgcggccccaccccacctatgag
gaggccctcagcgaggcgctggagagtctggcgggcaagctgtag

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