KEGG   Vescimonas coprocola: MM50RIKEN_23840
Entry
MM50RIKEN_23840   CDS       T07634                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
vcop  Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:vcop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vcop02048]
    MM50RIKEN_23840
Prokaryotic defense system [BR:vcop02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    MM50RIKEN_23840
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: BCK82621
UniProt: A0A810QAP0
LinkDB
Position
complement(2483051..2484844)
AA seq 597 aa
MGLMQQAYDTYCAMESQYAGIYGKAKEPLVPVSHQIVNAELELTLDADGHLLDARSVEAE
QAATIIPVTESSSGRTGKAPGAHPLCDQIQFLSPLYPAKYESYLTQLHRWELSPYGHPKL
SAIARYVEKGTIAADMAQRGLIALDEKGFPVKEKQIVRWRVETGGENETPACWQDQSLFQ
AFIDYYASTKSEKPAFCMVTGKNAPPASQHPKKIINLCANAKLISANDTSGFTYRGRFTD
DSQAATMSYEASQKIHSALHWLAATQGVFIGGRTFLCWNPQGIEIPKPQAAFLRRGAAKQ
IKYSDYRKALSETLRGWQETIPRDAGAVVAAFDAATSGRLSLTYYSELPVSDFLERLHDW
DALCCWEHSSFGIQSPSLSQIADCAFGTVRISDKQTKLETDERVMRQQVQRLLSCRVDRG
KMPADIARAAAAKASNLQIMDTALRETVLFTACAVLRKYKYDWYKEEWSMALEPQKKDVS
YQYGRLLAVFEKLERDTYDPNEQREPNAIRMQSVFAKRPLYASRIIWEQLKKAYYPKLKP
GARTKYDRIIEQIIQEISSFPQAEQEEALKDTYLFGYYLQRSALYTSGKTENSQEEE
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgggactgatgcagcaagcctatgacacctactgtgccatggagtcgcaatacgccggt
atctacggcaaggcgaaggagccactggttcctgtttcgcaccaaatcgtaaacgcagag
ctggagctcactctggatgcggacggtcatctactggacgcccgttccgtcgaggcggag
caggccgccacgatcatccctgtgacggagagttcctcagggcgaactggcaaagccccc
ggcgcacaccctctgtgcgaccagattcagtttctctccccgctgtatcccgccaaatac
gaaagctacctgacacagctgcaccgctgggagctatcaccctacggccaccccaagctc
tccgccatcgcccgctatgtggaaaagggaacaatcgcagcggatatggctcagcgcggc
ctgattgcactggatgaaaaaggctttcctgtcaaggaaaagcagatcgtccgctggcgt
gtagagacaggtggggaaaatgagacgcccgcctgctggcaggatcagagcctcttccaa
gccttcatcgactactatgcatccacgaaatctgagaagcccgcattttgcatggttacc
ggtaaaaacgccccgcccgccagccagcaccccaagaagatcatcaacctgtgcgccaac
gccaagctgatctccgccaacgacaccagtggctttacctatcggggccgcttcacagac
gattcgcaagctgcaactatgagctacgaggcatcgcagaagatccacagcgcgctgcac
tggttggcggcgacccaaggtgtcttcatcggcgggcgcaccttcctatgctggaatccg
cagggcattgagatccccaaaccgcaggccgccttcctgcggcggggcgccgccaagcag
ataaaatactccgactatcgaaaagcgttgtcggaaactctccggggctggcaggagacg
atcccgcgggacgccggcgccgtagtggccgcctttgacgccgccacatccggacgactt
tccctcacctattacagcgagcttccggtctctgattttctggagcgcctgcacgactgg
gatgcactttgctgctgggagcattcctccttcggcatacagtcaccctcgctttcgcag
atcgcagactgcgccttcggcacggtgcgcatctccgacaagcagacaaagctggaaacg
gacgagcgcgtcatgcgccagcaggtacagcggctgctctcctgccgggtggaccggggc
aaaatgccggcggatatcgcccgtgctgcagcggccaaggcgtccaacctgcagatcatg
gataccgccctgcgggaaacggtattgttcaccgcctgtgcggtgcttcggaaatacaaa
tatgattggtacaaggaggaatggagcatggcactggaaccgcagaagaaggatgtcagc
tatcagtacggacggcttttggccgtgtttgaaaaacttgagcgagacacctatgacccc
aatgaacagcgagagcccaacgcgatccggatgcagtccgtgttcgcaaagcgtccactc
tacgccagccggatcatctgggagcagttgaaaaaggcgtactaccccaaactcaagccc
ggcgccagaacaaaatacgaccgcatcatcgagcagatcatccaagaaatttcctccttc
ccgcaggcggaacaggaggaggccctgaaggacacctatctctttgggtactatctgcag
cgcagtgcgctgtacacatccggtaagaccgaaaacagtcaggaggaagaataa

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