Vescimonas coprocola: MM50RIKEN_24350
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Entry
MM50RIKEN_24350 CDS
T07634
Symbol
rocR_2
Name
(GenBank) arginine utilization regulatory protein RocR
KO
K06714
arginine utilization regulatory protein
Organism
vcop
Vescimonas coprocola
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcop03000
]
MM50RIKEN_24350 (rocR_2)
Transcription factors [BR:
vcop03000
]
Prokaryotic type
Helix-turn-helix
Other families
MM50RIKEN_24350 (rocR_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_3
AAA_7
AAA_16
SpoVT_C
AAA_2
bpMoxR
PAS_4
AAA_22
GAF_2
DUF815
HTH_30
IIGP
Motif
Other DBs
NCBI-ProteinID:
BCK82672
UniProt:
A0A810Q8S6
LinkDB
All DBs
Position
2544066..2545469
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AA seq
467 aa
AA seq
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MRYHDERLRWLQENFSYIDSVTMIDATGKITVKERYNPRYSDAENAADNEWCLNRNLLEV
FPSLSHSDSTLLQALQKGELLYRENQCTINHSGKKSVTSNVTFPIISRGKIIGAVELSRD
VTHYEGERTAPAARPTPKRRSGTEAKWTLEDIVTQNSKMLEIKRTIAKVADSRSSVLVYG
ETGTGKELIVSALHNAGSRKDQPFVAVNCAALPESILEGLLFGSQKGAFTGAENKKGMFA
EANGGTIYLDEINSMPLLLQAKLLRVLQEKSVTPLGASKPIPLDVRIIASTNRPISEVVA
SGQMREDILYRLNTISIQIPPLRRRLDDIPLLAAAFVEKYSAEMGKQVAGVAPEVTAFLM
NRSWRGNVRELEHVIESAMNVVEDGQTVELEHLPIYLSEVDELEEDTPEHSPREAVSLNE
ALAAYEKKLILAAMKASNWKIVDAAARLRIPRTSLQYKLEKYDIKRR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatcatgacgagcgcctgcgctggctgcaggagaacttcagctacattgattct
gtcaccatgatcgacgccactggcaagatcactgtgaaggagcgctacaatccccgatat
agcgatgcggagaatgctgcggataacgagtggtgtctcaaccgcaacctgctggaggtg
tttccgtccctgagccacagcgacagcaccttattgcaggccctgcagaagggcgagttg
ctgtaccgggagaatcagtgtaccatcaaccactccggcaagaaatccgtgaccagcaac
gtgacctttcctatcatcagccggggaaagatcattggggccgtggagctgtcacgggat
gtgacccactatgagggggagcggacggctccggcggcccggccgacgcccaagcgccgc
tccggcaccgaggccaagtggacgctggaggatatcgtcacccagaacagcaagatgctg
gagatcaagcgcaccattgccaaggtggcggacagccgctcctcggtgctggtgtacggc
gagacgggcacgggaaaggaactcatcgtctcggcgctgcacaatgccggcagccgcaag
gatcagccctttgtggcggtgaactgtgccgccctgccggagagtattctggagggactg
ctgttcggttcccagaagggggcatttaccggggcggagaacaaaaaggggatgtttgcc
gaggccaacggcggcaccatctatctcgatgagatcaactccatgccgttgctgcttcag
gcgaagctgctgcgggtgctgcaggagaaatcggtgacaccgttgggagcctccaagccg
atcccgctggatgtacgcatcatcgcatccaccaaccggccgatcagcgaggtggtggcc
agcggccagatgcgggaggatattctgtaccggctcaataccatcagcatccagatcccg
cccttgcggcggagactggacgatatcccccttctggcggcggcatttgtggagaaatac
agcgccgaaatgggcaaacaggtagcgggcgtggcgccggaggtgacagccttcctcatg
aaccgcagctggcgaggcaatgtccgggagctggagcacgtcatcgaatctgccatgaat
gtggtggaggacggccagacggtggagctggagcatctgccgatctacctcagcgaggtg
gatgagctggaggaggataccccggagcatagcccacgggaggcggtgtccctcaacgag
gcattggcagcctacgagaagaagctgattttagcggccatgaaggccagcaactggaag
atcgtggacgcagcggcccggctgcggatcccacgcaccagcctgcagtataagctggaa
aaatacgatatcaagcgacggtaa
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