Vagococcus carniphilus: H9L18_01735
Help
Entry
H9L18_01735 CDS
T06797
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vcp
Vagococcus carniphilus
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcp03019
]
H9L18_01735
Messenger RNA biogenesis [BR:
vcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9L18_01735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QNN73341
LinkDB
All DBs
Position
333315..334256
Genome browser
AA seq
313 aa
AA seq
DB search
MKKLRELAVDETFELFALLKMADVRVARNGKKFIAFTFQDTSGTIDGKYWGASEEEIEKF
VAGKVVLLGGKRETYQNMPQIKILNLRLAQVGEPEDPALYMEKPPVQIDELKETFNKYLF
EITNAKWHRIVRHILGKYQKEFFDFPAAKRNHHAFVGGLAYHTITMLELAKGVCSQYPEL
NPSLLYAGVILHDIGKVKELSGPVGTEYTLAGNLLGHIVMVDEEITKACVELNISETDEE
ILVLKHVVLAHHGLLEYGSPVRPKIMEAEILHHLDNLDASMQMMLGALKQVEPGEYTDRI
FGLDNRNFYLPKI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaactaagagaattagctgtagatgaaacatttgaactatttgccttattaaaa
atggcagatgtcagagttgctagaaatggtaaaaaatttattgcttttacttttcaagat
acatctggcacaattgatggtaagtattggggagcttctgaggaagaaatcgaaaaattt
gttgctggtaaagtagtgcttttaggtggtaaaagagaaacttatcaaaacatgcctcaa
attaagattcttaatcttcgtctagcacaagtgggagaaccagaagatccagctctttat
atggaaaaaccacccgttcaaattgatgaattgaaagaaacatttaataaatacttattt
gaaattacgaatgctaagtggcatcgaattgtacgtcacattttagggaaatatcaaaaa
gaattttttgattttccagcagctaaaagaaaccatcacgcctttgtaggtggtttagcg
taccatacgattaccatgttagagttagcaaaaggggtttgcagccaatatcctgagctg
aatccatccttactttatgccggtgttattcttcatgacatcggaaaagtaaaagaatta
tcaggtccagttggtacagagtatacattagccggaaacttattaggacacattgttatg
gtagatgaagaaattaccaaggcttgtgtggaacttaatatttctgaaaccgatgaagaa
atccttgttctaaaacatgtggtattagctcatcatggtttactagaatatggttctcct
gttagacctaaaattatggaagcagaaatcttacatcatttagataatctagatgcttca
atgcaaatgatgttaggtgcgcttaaacaagttgaaccaggcgaatacacagatcgtatt
ttcggtttagataatcgtaacttttatttgccaaaaatttag
DBGET
integrated database retrieval system
