Vagococcus carniphilus: H9L18_02355
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Entry
H9L18_02355 CDS
T06797
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vcp
Vagococcus carniphilus
Pathway
vcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9L18_02355 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcp03400
]
H9L18_02355 (ruvB)
Enzymes [BR:
vcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L18_02355 (ruvB)
DNA repair and recombination proteins [BR:
vcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9L18_02355 (ruvB)
RecFOR pathway proteins
H9L18_02355 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
nSTAND3
AAA_14
TIP49
AAA_16
RNA_helicase
NB-ARC
AAA_24
AAA_3
AAA_25
ResIII
Sigma54_activ_2
DUF815
Bac_DnaA
AAA_18
TsaE
IstB_IS21
NTPase_1
Rad17
MCM
AAA_11
Parvo_NS1
AAA_17
AAA_19
AAA_33
ATPase_2
NPHP3_N
Torsin
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QNN73459
LinkDB
All DBs
Position
453466..454476
Genome browser
AA seq
336 aa
AA seq
DB search
MNEEESRLLSSEAEQSEEFLEKSLRPQYLSQYIGQDKVKRELEIYIKAAKQREESLDHVL
LYGPPGLGKTTMAMVIANEMMVNIKTTSGPAIEKPGDLVAILNELEPGDVLFIDEIHRLP
RVAEELLYSAMEDFYVDIMVGQGPNAHPVHFPLPPFTLVGATTRAGMLSAPLRDRFGIIC
HMEYYEDDDLKEIVLRSADIFATDIVESGAFEIARRSRGTPRIANRLLKRVRDFAQVEGN
GEIDIQLADEALKMLQVDHKGLDYVDQKILRTMIELYNGGPVGLTTIAVNISEETETVED
MYEPYLIQKGFIKRTQRGRVVTEFAYEHLGYDFYKE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggaagaaagtcggcttttatcaagtgaagcagaacaatccgaagagttttta
gaaaagtcactccgacctcagtatttatctcaatacattggtcaggataaagtgaagcga
gaacttgaaatttatattaaagcagctaaacaaagagaagaatcattagaccatgtctta
ctttacggccctcctggattaggaaaaacaacgatggcgatggttattgctaacgagatg
atggttaatatcaaaacaactagtggaccagcaattgaaaaaccaggagatttagttgcc
attttaaatgagttagagcctggagatgttttatttattgatgagattcaccgattacct
cgagtagcagaagagcttctttattcggctatggaggatttttatgtagatattatggtg
ggacaaggtccaaatgctcaccctgttcattttcctttaccgccttttacattagttggt
gcaacaacaagagcaggcatgttatcagctcctttaagagatcgttttggaattatttgc
catatggaatattatgaagatgatgatttaaaagaaatcgttctaaggtcagctgatata
tttgcaacagatattgttgaatccggtgcttttgaaattgcgagacgatcaagaggcaca
ccacgtattgccaatcggttattaaaacgtgtccgtgactttgctcaagtcgagggaaat
ggtgaaattgacatccaattagcagatgaagccttaaaaatgcttcaagttgaccataaa
ggattagactatgtggatcaaaaaatactaagaacaatgattgaactctataatggagga
ccagttggcttaaccacgattgcggttaatattagtgaagaaacagaaacggtagaagat
atgtatgaaccttatttgatacaaaaaggattcattaaaagaacgcaaagaggtcgagtg
gtgacagaatttgcttatgagcatttaggttatgacttttataaagaatga
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