Vagococcus carniphilus: H9L18_02645
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Entry
H9L18_02645 CDS
T06797
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vcp
Vagococcus carniphilus
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcp03400
]
H9L18_02645
DNA repair and recombination proteins [BR:
vcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9L18_02645
Archaeal homologous recombinant proteins
H9L18_02645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
ABC_tran
DUF5972
Motif
Other DBs
NCBI-ProteinID:
QNN73514
LinkDB
All DBs
Position
504228..507362
Genome browser
AA seq
1044 aa
AA seq
DB search
MQPIRLKLENFGPYEDSLIDFSDFYAQSLFLITGKTGAGKTTIFDGMTYALYGNTSGGLR
QGKEMRSNFAEVGSKTCVTFTFKQENKTYEVVREPEQLVKKLRGEGFREQPATVRLTVFD
ENNNEIEQLTKQKDVGPFLSELIQLNESQFSQIVMLPQGEFRRFLNADSDSKEKVLRKLF
NTYFYQDIADSLRAQKKAQESLLKDEHQVLNLLVGQIEWQDDFKEKQTDNMYYQDLLTLY
GDQEKAYQEEEKTQLDVISKEKKELLKQDELIQAEKKWLEYFKELESARKKQNDLSKKEV
NILEDKRRVALLKEVEKIKPTYEYLLTLEKEYDSLLIKEKELRLKEETISVKLKKNQEIL
AERLANEVEIEKDKQELINIETSLPLFKRKETLEKEQKNLKEELDSLLKLQKKLALEQDS
INQRLVAGKNILAKKPKAIETKFQLVKEEEDNQTRLVEIKKYQKKKFALEELTLQLEDVQ
KQVLKTREQKEIKLNEQKQVKSDWAKAQIAKLSLELVEGEMCPVCGSLEHPSPTHVEVMT
KEEMILLEEKVETIEIELAQISETIVSLDKTKEFKESEKETFEKELEDLRNQINLLFEKE
VSESDWLLRNQEKTDELVIKRQHNEVELNQIEEQITILEEAESRQKEVSEQLNQMQERVR
ELENKNLQVTVSYAEINERLPKKWSALKEMMEESETLSSKVEKWEKEVATLKNDINKSEQ
QQLVTKTTLKNELEQKNVLENKLAQEQKKVDLFKETQEFSMSDLNELITQVEQITTLEED
IQAFEKESYALKEEMTKLDHLLDGREKPELEPLMLVRDTLNNSLEKNKERLNTLQYRMSQ
NKKIILQVREKELSIKEQLEALEELTELANVMTGDGPNKLSMERFVLQTYLKRILKRGNE
KLTLLTNGRYQFELKEEQGSFKKKTGLEINIFDDNTGTLRGVNTLSGGESFIAALSLALS
LAEVIQEEAGGIKIEAMFIDEGFGSLDEDALEMAIRALESIEGEGRLIGIISHVRELKER
IPQQLQIKSTLDGKSYVTERLEFE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaattcgattaaaattagaaaattttggtccatatgaagatagtttgattgat
ttctccgatttttatgcccaatctttgtttttgattacaggaaaaacaggggcaggtaaa
acaactatttttgatggtatgacttatgcgttatatggaaatacgtcaggtggattaaga
caaggaaaagagatgcgttctaactttgctgaggttggaagtaagacttgtgttactttt
acctttaaacaagaaaacaaaacctatgaagtggtaagagaacctgaacaattagttaaa
aaattaagaggtgaaggttttagggaacagccagcaacggttaggttaacggtttttgat
gaaaataataatgagattgagcaattgaccaaacaaaaagatgtaggtccattcttaagt
gagttgattcaattaaacgaatctcaattctctcaaattgttatgcttcctcaaggagaa
tttcgtcgttttttaaatgctgatagtgatagtaaggaaaaagttttaagaaaattattt
aatacgtatttttatcaagatattgcggattctttaagagcgcagaaaaaagcacaagaa
agtcttttgaaggatgagcatcaagtattaaatctattagtagggcaaatagaatggcaa
gatgactttaaagagaaacaaacagataatatgtattatcaagatttgcttaccctctat
ggggaccaagaaaaagcgtatcaagaagaggaaaaaacacagttagatgtaataagtaaa
gaaaaaaaagaacttttaaaacaagatgagttgattcaagcagagaaaaagtggttggag
tattttaaagaattagagtcagcacgtaaaaaacaaaatgatttatctaaaaaagaagtt
aatatattagaagataaaagacgagtagctctcttaaaagaagttgaaaaaataaaacca
acttatgaatatttattaactcttgaaaaagagtatgactctttattgataaaagaaaaa
gaactaagacttaaagaagagactatttcagttaaattaaaaaaaaatcaagaaatactt
gctgaacgtttagctaacgaagttgaaatagaaaaagacaagcaagaactaataaatatt
gaaacaagcttgcctttatttaaaagaaaagaaacccttgagaaagaacaaaaaaattta
aaagaagagctagattcgttactaaagttacaaaaaaaattagcacttgaacaagactct
atcaatcaacgacttgtagcaggaaaaaatatattagctaaaaaacctaaagcaattgaa
actaaatttcagctagtgaaagaagaagaggataaccaaacaagattagttgaaattaag
aagtatcaaaaaaaaaaatttgctttggaggagctaacccttcagttagaagatgttcaa
aaacaagttttaaaaacaagagaacagaaagaaataaaattaaatgaacaaaaacaagta
aaaagtgattgggctaaagctcaaattgccaaactaagtttagaattagtagagggcgag
atgtgtcctgtttgcggttctttagagcatccttcaccaactcatgttgaagtgatgaca
aaagaagaaatgatactcttggaagaaaaagttgaaacaattgaaatagagttagcacaa
atcagtgaaacaattgtttccttagataaaacaaaagagtttaaagaatcagaaaaagag
acatttgaaaaagaactggaagacttacgaaatcagattaatttattgtttgaaaaagaa
gtatcagaatcagattggttattaagaaaccaagaaaaaactgatgaactagtaattaag
cgacaacataatgaagtagaattaaatcagatagaagaacaaataaccatactagaagaa
gctgaaagtcgtcaaaaagaagtgtcagagcagttaaatcaaatgcaagaaagagttcga
gaacttgaaaataaaaatttacaagtaacggtttcttatgcagaaataaatgagcgatta
cctaaaaaatggtcagctttaaaagagatgatggaagaaagtgaaacactgtctagtaaa
gttgagaaatgggaaaaagaagttgctacattaaaaaatgatattaataaatcggagcaa
caacagttagttactaaaacaacgcttaaaaatgaattagaacaaaagaatgttttagaa
aataaattagctcaggaacagaaaaaagtagacttatttaaggagactcaggagttttct
atgtctgatctcaatgagttgattactcaagtagaacaaataaccacgttagaagaagat
attcaagcgtttgaaaaagagtcatatgcattaaaagaagaaatgactaaactggatcat
cttcttgatgggcgtgaaaaacctgaattagaaccattgatgttagtaagagatacttta
aacaatagtttagaaaaaaataaagaacggttaaacacactacaatatcgaatgagtcaa
aataaaaaaataattcttcaagtaagagaaaaagagttgagtattaaagagcagctagaa
gcattagaagaattaacggaattagcgaacgtgatgacaggtgatgggccaaataaatta
agtatggagagatttgttcttcagacctatttaaaacgtattttaaaaagagggaatgag
aaactaaccttactaactaatggacgttatcaatttgaattaaaagaagaacaaggatcg
tttaaaaagaaaacaggacttgaaattaatatatttgatgataatacgggaactttaaga
ggtgttaatacgttatctggtggagaaagttttatagcagctttatcattagcgctgtca
ttagctgaggtcattcaagaagaagctggaggcattaaaattgaggctatgtttattgat
gagggatttggttcattagatgaagatgctttagagatggcgattcgagctcttgaaagt
atcgaaggagaaggtcgattaatcggtattatttctcacgttagagaactaaaagaaaga
ataccacaacaattacaaattaaatcaaccttagatggaaaaagttacgtaactgaacga
ctagaatttgaatag
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