Vagococcus carniphilus: H9L18_02800
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Entry
H9L18_02800 CDS
T06797
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vcp
Vagococcus carniphilus
Pathway
vcp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L18_02800 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcp03019
]
H9L18_02800 (groL)
03110 Chaperones and folding catalysts [BR:
vcp03110
]
H9L18_02800 (groL)
03029 Mitochondrial biogenesis [BR:
vcp03029
]
H9L18_02800 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcp04147
]
H9L18_02800 (groL)
Enzymes [BR:
vcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
H9L18_02800 (groL)
Messenger RNA biogenesis [BR:
vcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
H9L18_02800 (groL)
Chaperones and folding catalysts [BR:
vcp03110
]
Heat shock proteins
HSP60 / Chaperonin
H9L18_02800 (groL)
Mitochondrial biogenesis [BR:
vcp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
H9L18_02800 (groL)
Exosome [BR:
vcp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
H9L18_02800 (groL)
Exosomal proteins of other body fluids (saliva and urine)
H9L18_02800 (groL)
Exosomal proteins of breast cancer cells
H9L18_02800 (groL)
Exosomal proteins of colorectal cancer cells
H9L18_02800 (groL)
Exosomal proteins of bladder cancer cells
H9L18_02800 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Ran-binding
Motif
Other DBs
NCBI-ProteinID:
QNN73544
LinkDB
All DBs
Position
complement(538992..540623)
Genome browser
AA seq
543 aa
AA seq
DB search
MTKDIKFSEDARSSMMRGVDTLADIVKVTLGPKGRNVVLDKSFGSPLITNDGVTIAKEVE
LEDRFENMGAQLVAEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE
LATKKAVEELHAISKQVDSKEAISQVAAVSSGSETIGELISEAMEKVGNDGVITIEESKG
IETELDVVEGMQFDRGYLSQYMVTDTDKMETVLENPYLLITDKKISNIQDILPLLEQILQ
QGKPLLIIADDVDGEALPTLVLNKIRGTFNVAAVKAPGFGDRRKEMLEDIAVLTGATVIT
DELGLDIKETTLEALGTASKVVVDKDTTTIVEGGGNKETIENRVALIRTQIAETTSDFDR
EKLQERLAKLAGGVAVVKVGAATETELKELKLRIEDALNATRAAVEEGIVSGGGTAFVNV
LPKVAEVEAEGDEATGVNIVLRALEEPVRQIAENAGLEGSVIVDKLKQAELGTGYNAKTD
EWVNMIDTGIVDPTKVTRSALQNAASVAALLLTTEGVIADKPSKDAPMMPGGGMDPSMMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagatattaaattttcagaagacgcacgtagttcaatgatgcgtggtgttgat
acattagctgatattgtaaaagtaacattaggacctaaaggacgtaacgttgttttagac
aaatcatttggctcaccccttattactaatgacggtgtgactatcgctaaagaagttgaa
ttagaagatcgttttgaaaacatgggagctcaattagtagctgaagttgcttcaaaaaca
aatgatattgcaggagacggaacaacaactgcaactgttttaactcaagctattgtgcgt
gaaggacttaaaaacgttacagctggagcaaacccaatcggaattcgccgcggaattgaa
ttagcaactaaaaaagctgttgaagaattacatgctatttctaaacaagtagactcaaaa
gaagctatctcacaagttgctgctgtttcttctggtagcgaaactatcggtgaattaatc
tctgaagcgatggaaaaagttggtaatgacggtgttattactattgaagaatctaaaggg
attgaaactgaattagacgtagttgaaggtatgcaatttgaccgtggctacttgtcacaa
tacatggtaactgatacagataaaatggaaactgttttagaaaatccttatctattaatt
actgataagaaaatttcaaacatccaagatatcttacctttattagaacaaatcttacaa
caaggtaaacctttattaattattgctgatgatgttgatggggaagctttaccaacatta
gtattaaacaaaattcgcggaacatttaatgtagctgctgttaaagctccaggatttggt
gaccgtcgtaaagaaatgttagaagatattgctgtattaacaggcgctacagttattaca
gacgaattaggtttagacattaaagaaacaacacttgaagcattaggtactgcaagtaaa
gttgttgttgataaagatacaacaaccatcgttgaaggtggcggaaataaagaaacaatt
gaaaatcgcgttgctttaattcgtactcaaattgctgaaacaacatctgactttgaccgc
gaaaaactgcaggaacgtttagctaaattagctggcggagttgccgtggttaaagttggt
gctgcaacagaaacagaactaaaagaattaaaattacgtattgaagatgctttaaacgca
actcgtgctgctgttgaagaaggaatcgtttcaggtggtggtactgcctttgttaacgta
ttacctaaagtagctgaagttgaagctgagggcgatgaagcaactggtgttaatatcgta
ttacgtgctttagaagaaccagttcgtcaaattgctgaaaatgctggtttagaaggttct
gttattgttgataaattaaaacaagcagaattaggtactggatacaatgctaaaactgat
gaatgggtaaacatgatcgatactggtattgtagatccaactaaagtaactcgttcagct
ctacaaaacgcagcaagcgttgctgcattgttattaactactgaaggtgttattgctgat
aaacctagtaaagacgctcctatgatgcctggtggcggaatggatccatcaatgatgggc
ggtatgatgtaa
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