Vagococcus carniphilus: H9L18_04955
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Entry
H9L18_04955 CDS
T06797
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
vcp
Vagococcus carniphilus
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcp03000
]
H9L18_04955
Transcription factors [BR:
vcp03000
]
Prokaryotic type
Helix-turn-helix
IclR family
H9L18_04955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR
HTH_27
HTH_24
Mga
HTH_11
DUF4143
C2_TCB1
MarR_2
TrmB
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
QNN73938
LinkDB
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Position
995329..996084
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AA seq
251 aa
AA seq
DB search
MEKKSPIIKNVVDTFRILDVLNEKEKAGIAFLSQQLDIPKTTIFRIIKTLEEVHVIKQLP
DSDYTLDYRLSAYAKSAAKDNQLVEMATPFMNQLKDSYSETVNLGILHENQVVIVQTVEG
EFYQLQASLVPMSPLYCSGMGKLFLSEYSEEELKHYFVDLKKRTVNTIVDYNEFLKNVEI
IKEEGISVDDEEYEYGLSCYAVPIYDKEGKMICSMSVSGPSSRLYHKGIDKLKSELKEKG
RALEEALQRNY
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaaagtccgattattaaaaatgtggtagatacttttcgaattttagatgtc
ttaaatgaaaaagaaaaagcgggaatagcttttttatctcaacagttagatattcctaaa
acaactatttttagaattataaaaactcttgaagaagtccatgtcatcaagcaattacca
gatagtgattatacattggactatcgattgagtgcttatgcaaaaagtgcagctaaagat
aatcaattagttgagatggcgactccttttatgaatcaactaaaagatagctattcagaa
acagttaatctaggaatacttcatgaaaatcaagtcgtgattgttcaaacagttgaagga
gaattttatcagctacaagcaagtttagttccaatgagcccactatattgttcaggaatg
ggtaaattatttttaagtgaatatagtgaagaggagttaaaacattattttgttgatttg
aaaaaaagaaccgttaatacgattgttgattataacgagtttcttaaaaatgtagaaata
attaaagaagaaggcatctcagtggatgatgaagagtacgaatatggtctttcttgttat
gccgttccaatttatgataaagaaggaaaaatgatttgttcaatgagtgtttcaggacca
tcaagtcgtttgtatcataaaggaatcgataagttaaaatcagaactaaaagaaaaagga
agagcacttgaagaagcgcttcaaagaaactattag
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