Vagococcus carniphilus: H9L18_06075
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Entry
H9L18_06075 CDS
T06797
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vcp
Vagococcus carniphilus
Pathway
vcp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L18_06075 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcp03019
]
H9L18_06075 (recQ)
03400 DNA repair and recombination proteins [BR:
vcp03400
]
H9L18_06075 (recQ)
Enzymes [BR:
vcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L18_06075 (recQ)
Messenger RNA biogenesis [BR:
vcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L18_06075 (recQ)
DNA repair and recombination proteins [BR:
vcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9L18_06075 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QNN74147
LinkDB
All DBs
Position
1214631..1216388
Genome browser
AA seq
585 aa
AA seq
DB search
MSQVLELLEEKFGYQTFRTGQETIINKILRSEDCLGIMPTGGGKSICYQLPALMFDGLTV
VVSPLISLMKDQVDALVDMGISATYINSTLNYQEIQRRLGIAARGEVKLLYVAPERLETS
DFTELLRHVKVDLIAVDEAHCISQWGHDFRPSYLNLAKTIRGFSPRPRIIALTATATPEV
AEDICELLSIPLENQIKTGFSRENLAFQVMKDQKDIFLLEYLKMNKGQSGIIYASTRKEV
ERIYRLLHHSQFSVGMYHAGMSEIERSRNQEAFAFDRINVMVATNAFGMGINKSNVRFVI
HAQMPGNIESYYQEAGRAGRDGLPSEAVLLYSAQDSQIQQYFIEQSEANIEYQQNEYLKL
REMNQYAHTEGCLQKYILKYFGETGSDCGRCNNCLDDRESVDITIDAQKVLSCVKRMGEK
FGKSLVGKVLTGSKDQKITQWHFEGLTTYGLMKEWTQKEVVQLIDYLTAEEYLIPSKGQY
PLLSVSDKGIDCLLGKKQVFRKQLVVKQLVVDDALFNQLRELRSDIADEKNLPPYVIFSD
KTLQEMVEKQPKNSIEFLQIKGVGQNKLDQYGEMFMKLIKENQTK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagttttagaattattagaagaaaaatttggttatcaaaccttccgaacaggg
caagaaacaatcatcaataaaattttgagaagcgaggattgtcttggcattatgccaaca
ggtggagggaaatctatttgttatcagttaccagcactaatgtttgatgggttaactgtg
gttgtttctcctttaatctctctaatgaaagatcaagtggatgctttagttgatatgggc
atctctgctacttatattaatagtacgttgaactatcaagaaatccaaagaagactagga
attgctgcaagaggtgaagtgaaactactttatgttgctccagagcgacttgaaacctca
gattttacagaattactgcgacatgtcaaagttgatttaatcgcggttgatgaagctcat
tgtatttctcagtggggacatgattttcgtcccagttatttaaacttagcaaaaacgatt
cgcggattttctccaaggcctagaatcattgcattaacagcgacagctactccagaagtt
gcagaagatatctgtgaattattatcaattccattagaaaatcaaattaaaacgggcttt
tctcgtgagaacctagcttttcaagtaatgaaagaccaaaaagatattttcttattagaa
tatttaaaaatgaacaaaggtcagtctggtattatttatgctagcactagaaaagaagtc
gagagaatttatcgcttgcttcatcatagtcaattttctgtaggtatgtatcatgccgga
atgagtgaaatagaaagatctagaaatcaagaagcctttgcttttgatagaattaatgtc
atggtagccactaatgcttttggcatgggaattaataagagtaacgttcgatttgttatt
catgctcaaatgcctggtaatatcgaatcttactatcaagaagcaggacgagctggaaga
gatgggttacctagtgaagctgtcttactttacagcgcacaagattctcaaattcaacaa
tatttcatcgagcagtcagaagctaatattgagtaccagcaaaatgaatacttaaagcta
agagaaatgaatcaatatgctcatactgaaggatgtttacaaaaatatattttaaaatac
tttggtgaaacaggttcagattgtggacgttgtaacaactgtctagatgatagagagtct
gttgatattacgattgacgctcaaaaagtgttgtcatgtgttaaacgaatgggcgagaaa
tttggaaaatcattagttgggaaagttttaacaggctctaaagatcaaaaaataactcaa
tggcattttgaagggttaacgacttatggattgatgaaggaatggacgcaaaaagaagtt
gttcagttgattgattatttaactgctgaagaatatttgattccttccaaaggacaatac
ccgttattatctgtttccgataaggggatagattgtctgttgggtaaaaaacaagtcttt
agaaaacaattagtcgttaaacaattagtagttgatgatgctttgtttaatcaattacgt
gaattacgttcagatatcgccgatgagaaaaatctaccaccttatgttatcttttctgat
aaaacacttcaagaaatggttgagaaacaaccaaaaaactcaattgagtttctccaaatc
aaaggtgttggtcagaataaattggatcaatatggtgaaatgttcatgaaactgattaaa
gaaaatcaaacaaaatag
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