Vagococcus carniphilus: H9L18_07015
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Entry
H9L18_07015 CDS
T06797
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcp
Vagococcus carniphilus
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcp03016
]
H9L18_07015 (truB)
Enzymes [BR:
vcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H9L18_07015 (truB)
Transfer RNA biogenesis [BR:
vcp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H9L18_07015 (truB)
Prokaryotic type
H9L18_07015 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Glyco_hydro_120_ins
Motif
Other DBs
NCBI-ProteinID:
QNN74325
LinkDB
All DBs
Position
1418324..1419241
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AA seq
305 aa
AA seq
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MEGIIPVWKPRGMTSHDCVFKLRKILKMKKVGHSGTLDPDVDGVLPICIGKGTKVIEYIQ
DSNKIYMGEITLGFSTETEDASGEIVERTPITSEIETEMVDEAMRQLVGEITQIPPMYSA
VKVNGKRLYEYARNDEEVERPQRKAMIYSYERTTLPEYDKENQLMKWEFTVDCGKGTYVR
TLAVDTGKNLNVASHMSNLTRIKSGGFTKEECFTLEEIALLMDLERESEFLYPVERGVKD
FPKVELTKEMYQVIRNGSVVPTSFFENIVVTEPIALFYQEKVVSIYGEHPYKEGMLKPIK
VLRND
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaattattcctgtttggaaaccgcgtggtatgacaagtcatgactgcgtattt
aaattaagaaaaattttgaaaatgaaaaaagtaggacatagtggtacattagatcctgat
gtagatggtgttttacctatttgtattggtaaaggaactaaagtaatagaatacatccag
gattcaaataaaatctatatgggagaaataacactaggcttctcaactgaaacagaagac
gctagtggagaaattgtagaaagaacacctattacttcagagattgaaacagaaatggtt
gatgaggcgatgaggcaattggttggagaaatcactcaaataccaccaatgtattctgct
gtaaaagttaatggtaagagattgtatgaatatgctagaaatgatgaagaagttgagcga
ccacaaagaaaagctatgatttattcatatgagagaacaactttaccagaatatgataaa
gaaaatcaattgatgaagtgggagttcacagtggactgtggtaaaggaacttatgttaga
actttagcagttgatacaggcaaaaatttaaatgttgcatcacatatgtcaaatctaaca
cgaattaaaagtggtggatttacaaaagaagagtgcttcactcttgaggaaatagctttg
ttaatggatttagaaagagagtcagaatttttatatccagttgaaagaggcgttaaggat
tttccaaaagttgaattaacaaaggaaatgtaccaagtcattcgaaacggttcagtcgtt
ccaacgtctttttttgaaaatattgtggttactgagccaattgctttgttttatcaggaa
aaagttgttagtatttatggggagcatccttataaagagggtatgttaaaaccaattaaa
gtcttacgaaatgattaa
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