Vagococcus carniphilus: H9L18_07460
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Entry
H9L18_07460 CDS
T06797
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vcp
Vagococcus carniphilus
Pathway
vcp03030
DNA replication
vcp03430
Mismatch repair
vcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L18_07460 (dnaE)
03430 Mismatch repair
H9L18_07460 (dnaE)
03440 Homologous recombination
H9L18_07460 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcp03032
]
H9L18_07460 (dnaE)
03400 DNA repair and recombination proteins [BR:
vcp03400
]
H9L18_07460 (dnaE)
Enzymes [BR:
vcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L18_07460 (dnaE)
DNA replication proteins [BR:
vcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9L18_07460 (dnaE)
DNA repair and recombination proteins [BR:
vcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9L18_07460 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QNN71733
LinkDB
All DBs
Position
1511975..1515298
Genome browser
AA seq
1107 aa
AA seq
DB search
MSLGQLQVLTSYSLLKSTNQIDSLVSQSKKLGYEALAITDINAMHGAVEFYRACHKEGIQ
PIIGMTLSYQNEKFSDEEFNIILLAENKEGYENLIKISTIKMEYDDKEDFYLSAIEKFTK
DLVGILPWEKNEWLFMKEKQDELADSILTKITNLFSSNSIYQGVTLNTGEPEKRSSYLEH
YQQNTLPLVALQDVRYLTPSDHFSVDVLRHIDNGEQINIDFEQISGPYYLPEKDNFENQF
NEAGLSEALKNNGKIVDRCQSEIELNQKLLPAFPIESQINATDYLKQLCYEGLLERGLEQ
KANYIDRLEMELSVIHEMGYDDYFLIVWDVMKYARDKDIVTACRGSAAGSLVSYTLRITN
VDPIEYGLLFERFLNKERYTMPDIDMDLPDNRRDELLQYVNQKYGHHRVAQIATFGTLAA
KMALRDVSRVFGLRQSEANSWANAIPNVLKITLDQAYKDSRKLRELVEHSEKNRLLFDTA
RRIEGLPRHVSTHAAGVVISDQELTNFVPLQTGSNGIPLTQFAMGDVEAIGLLKMDFLGL
RNLSIIGNTIDSIEYVYKEKIDLEKIPLDDPETLDLFKRGATVGIFQFESEGIKKVLRKL
GPSSIEDIASVNALYRPGPMQNIDLFVDRKKGKVPISYPHANLKGILDYTYGIIVYQEQI
MQVASLMAGFSLGQADILRRAISKKKKDVLDTERKHFIEGSLKQGYTEQVASEVYDYIEH
FANYGFNRSHAVVYSVLAYQMAYLKVHYPESFFSSLLHSVKNNGTKIKEYINEAKKYQVK
VLPPDINKSEYSFTLSKGKILFGFSSLKGIRKDFIQHLINVRKEDGPFTSLENFLIRING
KWLKSANILPLIYIGAFDSLHGNRKQLIVDLDSTIRNIEYSGGSMDLLDVLSLKKEKTPD
FSLTEKLNQEAEYLGTYISGHPVDAYESLKKGRQISELSEVEVGKSGQFLLYVTQVKKIR
TKKGEAMAFLTANDGAKEIDVTVFPQLFRKLNLQVDENVVYMISGKIEESKYNQMPQLLA
DKLELADNILPFEQSKKCYIRIGSENETTLTLNKVKQILLKHTGLIPVILIFDHRKILLE
ETYWVDDSEELKVLILNLLGNKTIIFQ
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgagtctaggtcaattacaagtattaacttcttactcactgttaaaaagtaccaatcaa
atcgacagtttggtctcgcaaagtaaaaaattaggctatgaagcattagccattacagat
ataaatgctatgcatggagctgttgagttttatcgtgcttgtcacaaagaaggaattcaa
ccaattatcggaatgacgttaagttatcaaaatgaaaaattttctgatgaggagtttaat
ataattttattagcagaaaataaagaaggttacgaaaatttaattaaaatttctactata
aaaatggaatatgacgacaaagaagatttttatctttcggcgattgaaaagttcacaaag
gatctagttggtattctgccatgggaaaagaatgaatggttatttatgaaagagaagcag
gatgagttagcagatagcatactaacaaaaattaccaatcttttttcaagtaactcaata
taccaaggagttacactaaatacaggtgaaccagaaaaaagaagtagttacttagagcat
tatcaacaaaatactttaccgttagtagcacttcaagatgttagatatttaactccgagt
gatcatttttcagtggatgtcttacgtcacattgataatggagaacaaattaatatcgat
tttgaacaaatatctggaccctactatttaccagaaaaagataactttgagaatcagttt
aatgaagctgggctttcagaagctttaaaaaacaatgggaaaattgttgaccgttgccaa
tcagagatagaattaaatcaaaaattacttccagctttcccaatagaatcacaaataaat
gcaactgattatttgaagcagctttgttatgaaggattattagaacgtggtttagaacag
aaagctaactatattgatcgattagagatggagctatcggttattcatgagatgggctat
gatgactattttttaatagtttgggatgtgatgaaatacgctcgagataaagatattgtt
actgcatgtcgtggttcagcagctggttcattggtatcttacacattaagaataactaat
gtggatccaattgagtatggacttttgtttgaacgttttttaaataaagaacgctacaca
atgccagatattgatatggacttgccggacaatcgacgtgatgaactacttcagtatgtt
aatcaaaagtatggtcatcatagagtagctcaaattgcgacatttggaacattagctgct
aaaatggctttaagagatgttagtcgtgtttttggattaagacaaagtgaagctaacagt
tgggcgaatgctattccaaacgtattaaaaataacattggatcaagcctataaagactct
agaaaattaagagagttagtagagcattccgaaaagaatcgtttgctatttgatacagcg
agaagaattgaaggattaccaaggcatgtttcaactcatgcggcaggtgtggtaattagt
gaccaagagttaactaattttgttccacttcaaacgggatcaaatggaattccgttgact
caatttgcaatgggagatgtagaagctattgggttacttaaaatggattttcttggactt
agaaatttgtccattattggaaatacaatagattccattgagtatgtttacaaagaaaaa
attgatttagaaaagatacccttagatgatccagagactttggatctttttaaaaggggt
gcaacagttgggattttccaatttgaatcagaaggtattaaaaaagttcttagaaaattg
ggaccatcttctattgaagatatagcttctgttaatgctctttatcgaccaggacctatg
cagaatattgatttatttgttgatcgaaaaaaaggtaaagtgccaatttcttatccccat
gctaatttgaaggggatactggattatacttatggcatcattgtttaccaagaacaaatt
atgcaagttgcttctttaatggccggttttagtttaggacaggctgacatattaagacgt
gctattagtaaaaagaaaaaagatgttttagatacagagagaaaacattttattgaaggg
tcattaaagcaagggtataccgaacaagtagcaagtgaagtttacgattatatcgaacac
tttgctaattatggatttaacaggtcacacgcggttgtgtattctgttttagcttatcaa
atggcttatttaaaagttcattatccggaaagtttcttttcatctttattgcattcggtt
aaaaataacggaacaaaaataaaagaatacattaatgaagcgaaaaaatatcaagtaaaa
gtattaccacctgatattaataaaagcgaatatagttttactttaagtaaaggaaaaatt
ttatttggtttttcaagtttaaaaggaatcagaaaagattttattcaacatctaatcaat
gttcgtaaagaggacggtccgtttacatccttagaaaactttttaattcgaataaatgga
aaatggctcaaatcggctaatattctgcctcttatttatataggtgcttttgattcactt
cacggcaacagaaagcagttgattgtcgacttagatagcacaattcgaaatattgagtat
agtggtggcagtatggatttactagatgttctaagtttaaaaaaagaaaagacaccagat
ttttccttaacagaaaaattaaatcaagaggcagaatatcttggaacttatatttcagga
catccagttgatgcttatgagtcacttaaaaaaggcagacaaatttcagaactgtcagaa
gtagaggtaggaaaaagtggtcaatttctactttatgttacacaggtaaaaaaaatacgt
actaaaaaaggggaagctatggcttttcttacagcaaatgatggggctaaggagattgat
gtaacagtttttcctcaactttttaggaaacttaatttacaagttgatgaaaatgttgtt
tacatgatatccggaaaaatagaagagagtaaatacaatcagatgcctcaattgcttgct
gataagttagaattagcagataatatacttccttttgaacaatcaaaaaaatgttatata
cgaattggttctgaaaatgaaacaacacttacattgaataaagtgaaacaaattctgctc
aaacatactggtcttattcctgttattttaatttttgatcatagaaaaatactgcttgaa
gaaacttattgggtggatgattcggaggaattaaaggtcttaattctcaatttactcgga
aataagactattatatttcagtaa
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