Vagococcus carniphilus: H9L18_09475
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Entry
H9L18_09475 CDS
T06797
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
vcp
Vagococcus carniphilus
Pathway
vcp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H9L18_09475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vcp02022
]
H9L18_09475
Two-component system [BR:
vcp02022
]
NarL family
LiaS-LiaR (cell wall stress response)
H9L18_09475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
DUF6115
HTH_24
HTH_23
HTH_40
HTH_38
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QNN72115
LinkDB
All DBs
Position
complement(1936072..1936704)
Genome browser
AA seq
210 aa
AA seq
DB search
MIKVLLVDDHEMVRMGVSSYLMIQPDIEVIGEAENGLVGHEKALELRPDVILMDLVMDVM
DGIESTKKILSDWPEARIIIVTSFIDDEKVYPAIEAGAAGYLLKTSSAKDIANAIRSAHQ
GEKVLESEVTSKMMERLSKPKEHILHEDLTNREKEILLLISEGKSNQEIADELFITLKTV
KTHVSNILSKLDVEDRTQAAIYAFKHGIVK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
ttgattaaagtacttttagtggatgatcatgagatggttcgaatgggagtttcttcatac
ttgatgattcaaccggatattgaagttattggagaagctgaaaatggtcttgtagggcat
gaaaaagcattagagttaaggccagatgttattttaatggacttagtaatggatgtaatg
gatggaattgaatcgacaaaaaaaatcttgtcagattggccagaagcacgaattattatt
gtaactagttttattgatgatgaaaaggtttatcctgctattgaagcaggcgcagcaggc
tacctattaaaaacttcttcagcaaaagatattgctaatgcgattcgttctgctcatcaa
ggagaaaaggttttagaatcagaagtaacaagtaagatgatggaacgtttatcaaaacca
aaagaacatatattgcatgaagatttaacaaatagagaaaaagaaattctacttctaatc
tctgaaggaaaaagcaatcaagaaattgcagatgaattgtttatcacacttaagacggtt
aaaacacatgtctctaatatattatctaaattagacgtagaggaccgcacacaagcggct
atttatgcgtttaaacacggaatagttaaatag
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