Vagococcus carniphilus: H9L18_11830
Help
Entry
H9L18_11830 CDS
T06797
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vcp
Vagococcus carniphilus
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcp03016
]
H9L18_11830 (truA)
Enzymes [BR:
vcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
H9L18_11830 (truA)
Transfer RNA biogenesis [BR:
vcp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H9L18_11830 (truA)
Prokaryotic type
H9L18_11830 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
PS_Dcarbxylase
Arch_fla_DE
Motif
Other DBs
NCBI-ProteinID:
QNN72536
LinkDB
All DBs
Position
complement(2432534..2433271)
Genome browser
AA seq
245 aa
AA seq
DB search
MRNIKLTVEYDGRRYSGWQRLGDSDKTIQGKIETTIEKMTEEKVEIIGSGRTDAGAHSRG
QVANFKTESTMSLLEMQDYLNYYLPKDIVIKEIEEVPERFHARYNAKEKQYSYYVWNHRV
PSVFDHHHSYHYVEKLDLDRLNEACEKLVGTHDFLGFSSLKKSKKSTTRTIDSITVEEEN
GMLHFTFVGNGFLYNMVRIIMGTLLEIGDGTLEVSVIDDIFEQKVRRDAGKTVPAQALFL
DSVTY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattaaattaacggttgaatacgatggtcgccgctattcaggatggcaaaga
cttggtgattcagataaaacgatccaaggaaaaattgaaacgactattgaaaaaatgacg
gaagaaaaagtagagattattggttctggtcgaacagatgcaggtgctcatagtagaggg
caagtagcaaactttaaaacagaatcaactatgtcattattagaaatgcaagactattta
aattactatcttcctaaagatattgtgattaaggaaattgaggaagtaccggaaagattc
catgcaagatataatgcaaaagaaaaacaatatagctactatgtttggaatcatcgtgta
ccttctgtatttgatcatcatcatagctatcattatgtggaaaaattggatttagaccgc
ttgaatgaagcgtgtgaaaaattagtaggaactcatgactttttaggtttctcttcactt
aaaaaatctaagaaatcaacaacaagaactattgatagtataacggttgaagaagaaaat
gggatgttgcattttacatttgttggaaacggcttcttatataatatggttcgtattatt
atgggaaccttgttagaaattggtgatggaacattagaagtatccgttattgatgatatt
tttgaacaaaaagtaagaagagatgctggtaaaacagttccagctcaagctttattctta
gatagcgtaacttattaa
DBGET
integrated database retrieval system
