Vagococcus carniphilus: H9L18_12245
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Entry
H9L18_12245 CDS
T06797
Name
(GenBank) transcription antiterminator
KO
K03491
probable licABCH operon transcriptional regulator
Organism
vcp
Vagococcus carniphilus
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcp03000
]
H9L18_12245
Transcription factors [BR:
vcp03000
]
Prokaryotic type
Other transcription factors
BglG family
H9L18_12245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTS_EIIA_2
PRD
HTH_11
Mga
HTH_Mga
HTH_24
HTH_DeoR
HTH_AsnC-type
MarR
HTH_5
HTH_20
WHD_HrcA
FokI_D3
PF0610-like_N
GerE
Motif
Other DBs
NCBI-ProteinID:
QNN72616
LinkDB
All DBs
Position
complement(2522113..2523966)
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AA seq
617 aa
AA seq
DB search
MNISDRQMKIIKLLENSQGNRSSEDLAEELKVSSKTIKNDIKVLKSFFGDEIIEAKPGIG
YQLNKSLINLEKIEYKNEDFEILNILINQPTIDLYELADKVYISEATLLRKVALMNELIE
KEYDFLGIERKNNLLYIKGEENKRKIFNLFLNKELDSHTLDLSKYQFYFKNCDIKQLTQI
IFDFHQTIHLNLNDFSTVSFVLHMAVLIERINKKQFLNQFEEIKLDEKSYDLARQLIKEL
KKELSIDIPNEEIYYVAKLYSTKVVDSSIDQNEMIELVEAIVTSIDKNYFIQFNENEEFK
NFLNLHLISLYTRAKENKFLPNPLTEELKLKYPFIYTVTVYATSIIQKSWNLTIPDSEIG
YIALHFLSAYKSMKNKDSKKVVLISSLGKGGMLLVERQLNLISSFSFQIVSHQSIFDKSG
IPENVDLVLSTVKLAKENLPHVYYFNQMLTAEDLKQIEKIVSTKKELSIFDKYFHKDLFF
SQCSFSNKEEVITFLCKKLEKQGFCQEDYLQKVLDREEISSTSYGNYYAIPHAIKREATE
NAIAVCSLKKPIYWGTHKVKIIFLLSLKTERDESFEALFDQLFYLLEKKEIIKKLAGQES
YEGFMALCNEVYSEKSL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatcagatagacaaatgaaaataatcaaactattagaaaattctcagggaaat
cgttcttcggaagatcttgctgaagaattaaaagtctcatctaaaacaataaaaaatgat
ataaaggtattaaaatctttttttggtgatgaaatcatagaggcaaaacctggtattggt
tatcaattaaataaatcattaattaatttagaaaaaattgaatataaaaatgaagatttt
gaaattttaaatatcctaattaaccaaccaactatcgatttgtatgagctagcagataaa
gtatatataagtgaggccactctattaagaaaagtggccttaatgaatgaacttatagaa
aaagaatatgattttttaggaattgaaagaaaaaataatctgctttatattaaaggagaa
gaaaataaacggaaaatttttaatctatttttgaataaagagctggatagtcatacacta
gatctttcaaaatatcagttttattttaaaaattgtgatatcaagcaattaactcaaatt
atttttgatttccatcaaacaatccatttgaacttgaatgatttttcaacagtgtctttt
gtccttcatatggcagttttaattgaaagaattaataagaaacaatttctaaatcaattt
gaagaaataaaattagatgaaaaaagctatgaccttgcaaggcagttaataaaagagcta
aaaaaagaacttagtatagacataccgaatgaagaaatttattatgttgctaaattgtat
tcaacaaaagttgtagactcaagtatcgatcaaaatgagatgatagaattagtggaggca
atagtcacttcaatagataagaattattttattcaattcaatgaaaatgaagaatttaaa
aattttttaaatcttcatttgatttccttatatacaagagcaaaagaaaataaattctta
cctaatccattaacagaagaattaaaattgaaatatccatttatctatacagtaacagtt
tatgcaacgtctattattcaaaaatcttggaatttaacgattcctgatagtgaaattggc
tatattgcattacattttttatcagcatacaaatctatgaaaaataaagatagcaaaaaa
gtagtgttaatctcttctttagggaagggaggtatgttattagttgaacgtcagttgaac
ttaatttcctctttttcatttcagattgtgtctcatcaatcaatttttgataagagtggc
attccagaaaatgtggatttagttttatcaacggtaaaattagctaaagagaatttgcca
catgtttattattttaatcaaatgctaacagcagaagatctgaaacaaatagaaaagatt
gtatcgactaaaaaagaattatcaatttttgataaatattttcataaagatttatttttt
agtcagtgttctttttcgaacaaagaagaagttataacttttttatgtaaaaaactagag
aaacaaggtttttgccaagaagattatttacaaaaagtattagatagagaagaaatttct
agtacctcttatggtaattattacgcgattccccatgctattaaacgagaggcgactgaa
aatgcaattgctgtttgtagcctgaaaaagccaatatattggggaactcataaagtaaaa
attatttttttactatctctaaaaacagaacgagatgaatcatttgaggctttgtttgat
cagcttttttatcttcttgaaaaaaaagagattataaaaaaattagcgggtcaagagagt
tatgaaggttttatggcattgtgtaatgaggtttactcagaaaaatcactttag
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