Vagococcus carniphilus: H9L18_13135
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Entry
H9L18_13135 CDS
T06797
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
vcp
Vagococcus carniphilus
Pathway
vcp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
H9L18_13135 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vcp03011
]
H9L18_13135 (rpsD)
Ribosome [BR:
vcp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
H9L18_13135 (rpsD)
Bacteria
H9L18_13135 (rpsD)
Archaea
H9L18_13135 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
QNN72784
LinkDB
All DBs
Position
2709769..2710380
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AA seq
203 aa
AA seq
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MSRYTGPSWKISRRLGISLSGTGKELARRPYAPGQHGPNQRRNKSEYGLQLTEKQKLRHT
YGLTERQFRNLFMAAGNITEGKHGVNFMILLEQRLDNVVFRLGLATTRRQARQFVNHGHI
LVDGKRVDIPSYRVEPGQVISVREKSKDLAFIKEAVESTLGRPAFVSFDAEKLEGSLTRL
PEREELSQDIDESFVVEFYNKLL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgttatactggaccaagttggaaaatctcaagacgtttaggcatttcattatca
ggaactggtaaagaattagctcgtcgtccttacgcaccaggtcaacacggacctaaccaa
agaagaaacaaatctgagtacggtttacaattaactgaaaaacaaaaattacgtcatact
tacggcttaactgagcgtcaattccgtaacttatttatggctgctggtaacattactgaa
ggtaaacatggtgttaacttcatgatcttactagaacaacgtttagataacgtagttttc
cgtttaggtttagcaactactcgtcgtcaagcacgtcaatttgttaaccatggtcacatt
ttagttgacggtaaacgcgtagatatcccatcttaccgtgtagaaccaggtcaagtgatc
tcagttcgcgaaaaatctaaagatttagcattcatcaaagaagcagtagaatctacatta
ggtcgtcctgcatttgtaagctttgacgctgaaaaattagaaggtagcttaactcgttta
ccagaacgtgaagagttatcacaagatattgatgagtcattcgtagttgaattctacaac
aaattactttaa
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