Vibrio cholerae O1 2012EL-2176: EN18_03335
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Entry
EN18_03335 CDS
T03389
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EN18_03335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcq03000
]
EN18_03335
03400 DNA repair and recombination proteins [BR:
vcq03400
]
EN18_03335
Enzymes [BR:
vcq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
EN18_03335
Transcription factors [BR:
vcq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EN18_03335
DNA repair and recombination proteins [BR:
vcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EN18_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
AIT31842
UniProt:
A0A0H5XGB2
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Position
2:complement(667857..669215)
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AA seq
452 aa
AA seq
DB search
MTLLNELSAEVCQRARMSRDPRFDGRFFVAVKTTGIFCRPICPANLPKEENVEYFSSQAL
AVSAGYRPCLRCRPESAPHSWAWKGAETTFLRALTLIEQGELDGSLETLASRLGISDRYL
RQLFQRHLGMPPKQYAQIQQLMFAKQLLHTSQISITEVAYASGFQSTRRFNDAFQKLFRL
TPTQVRRERAALPSRNHLSLAFRGPFDWAHMLDFYRLRAIEGMELIDEQSYQRHFVLGEG
TGWFKASMAQSHLDIEFEMERLSDLRHLVARLRRMFDLDADLISIEAHLEQLAPGLVRRT
GIRIPGVWNAWEAGVRAVLGQQVSVKAAIGQLNLLVSTLAASEGSTRYFPTPEQVQMSDL
SFLRMPERRKETLKRLADYVRLHPMDSPMAWLSLSGIGPWTVDYAQLRGESRSHCFLTGD
LIVKKALAKFPQLTAESVAPWGSYATFHCWSH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcttaatgaattatccgcagaggtgtgccaacgcgctcggatgagccgagat
ccacggtttgatgggcgtttttttgttgcggttaaaaccacagggattttttgccgcccg
atttgcccagccaacctaccgaaagaagagaatgttgagtatttttcctcgcaagcgtta
gcggtatcggcgggctaccgaccttgtttgcgctgccggcctgaaagcgctccccattca
tgggcgtggaaaggagccgaaaccacatttctacgtgccttgactctgattgagcaggga
gagctggacggcagtttagagactttagcctcacgcttaggtatcagtgaccgttatctg
cgccagctttttcagcgtcatttaggaatgccgcctaaacaatatgcgcagatccagcag
ctcatgtttgccaaacaattactgcatacgagccaaatttcgattaccgaagtggcttac
gccagtggatttcagagcacccgccgttttaatgatgcgttccaaaaattatttcggttg
acgccgacccaagttcggcgagaacgagccgctcttccttctcgaaatcatctgagctta
gcttttcgcggcccttttgactgggcgcatatgttggatttttatcgtctgcgagcgatt
gaaggcatggagctgatcgatgaacagagctatcaacgtcattttgtccttggtgaaggt
acaggatggtttaaggcgagcatggcacagtcgcacttagacattgagtttgagatggag
cgtttgagtgatcttcgccacttagtcgctcggctgcgacgaatgtttgatctcgatgca
gacctgatcagtattgaggctcatttagagcagttagctccgggattggtacggcgcacc
gggatccgtatccccggggtatggaatgcatgggaagcgggagtgcgcgcagtgctcggt
caacaagtttcagtcaaagccgcaattggacaattgaacttgttagtctccacgctggcg
gctagcgaagggtcaacacgttatttcccaaccccagaacaagtgcaaatgagcgactta
agctttttacgtatgccggaaaggcgtaaggaaaccttaaaacgtttggcggactacgtc
cggttgcatcctatggattcgccaatggcgtggttatcgctaagcgggattggtccttgg
actgtcgattacgcgcaattgcgcggtgaatcacgtagccactgttttttaaccggagat
ttgatcgtgaaaaaagcactggcgaaatttcctcagttaactgccgaatcggtcgcccct
tggggcagttatgccacttttcattgctggagccactaa
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