Vibrio cholerae O1 2012EL-2176: EN18_03635
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Entry
EN18_03635 CDS
T03389
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EN18_03635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcq02000
]
EN18_03635
02044 Secretion system [BR:
vcq02044
]
EN18_03635
Transporters [BR:
vcq02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
EN18_03635
Secretion system [BR:
vcq02044
]
Type I secretion system
Adhesin protein transporter
EN18_03635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
PhoR
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AIT31900
UniProt:
A0A085PJ77
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All DBs
Position
2:739068..741182
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AA seq
704 aa
AA seq
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MQDTLLNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLD
QIPHLVFPVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFM
VKKQFRFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYD
KVVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRM
EARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGV
LILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVA
HMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAI
GPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPN
SPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHI
DIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQV
GEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLIL
ITHKTSMLDVVDRVIVMEKGCIIADGPKHEVLNDLRQGNVRAVQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatacgttactcaattcgctggtgtacgtaagccgttattatggtttagcgaat
tctcctgaagcactgatcaacggcttaccgttggctgacggcaagctcacgccttttctg
tttcctcgctcggcggaaagagctgggctgatcgcaaaagaaaaccgcgcgccgttagac
caaattcctcatctggtgtttcctgtggtattgctgctcaaaggcggtgaggcctgcgta
ctcaatagcatcaatcaggaaacgcaagaggctgaaattgttaccgcagagtcggggtta
gtccccgtcgcttactcgctcagtgatttagaagcgatgtatattggccgttactttatg
gtcaaaaagcagtttcgctttgatgaacgctcaccagaagtcctgaaacccagagatggg
cactggttttggagcaccatctataaatccaagcatatttatcgcgatgtgttgatagcg
tcactgctgattaacttgtttgccgttgcagcgccgatgttttcacggattgtgtacgac
aaagtcgtccccaatttggcttttgaaaccttgtgggtgctctctagcggcatcttagtg
atctttttgttcgatttcgtatttaaaatgctgcgcagctacttcattgatgtcgcagga
aaaaaatcggacattctgatctcttccaaactgtttagtaaagtgatgggcatccgcatg
gaggctcgcccaccttcggttggtgcttttgctcgccatttgcaagagtttgaatcgatt
cgtgaattttttacatccgcgacgatttcttcactgattgatctgccattcgccctgctc
tttttagtgttgatctggttaatggctggacatttggtgtgggtgcctgtgatcggtgtc
ctgattttggtgatttactcatttctcattcaaagccgcttaaaacgggcaattgaagaa
ggctcaagactcgcctcacaaaagtacgccaacctcatcgaaagcttagcaggactagaa
acggtgaagctgtttggcgcgcaaggacaattccagtaccgctgggaagaagccgtagcg
cacatggcgaattggaacattaaaagtcgccgcatcaccgatagtattcaaaacaccgcc
ggttttgtgcagcaagcagccaatatcggcatgatcattgtcggggtctacctgatttcc
aacggtgacctgaccatgggtggactgattgccgcaacgatgctcagtggccgtgcgatt
ggccccttagtacagctctcactgctttcaacccgttacaaccaagccaaatcttctatg
actatcattgaacaagtgatgtcgatgcctgatgaacaggaggaaggcaaacgctatatc
catcgtcccatcattcaaggcaagattgagctggaccgcgtgactttccattatccaaat
tcacctatcgcctccgtccgtgatttaagtcttaccatccatccgggtgaaaaagtggcg
attattggtagaattggttcgggtaaaaccacgcttgagcgcttgatcatgggcctgtac
aagccaactgaagggcatgtgcgaattgatgatacggatatctcgcagctgcatcacatc
gatattcgccgcaatattggctgtgtaccgcaagacagtgtgctgttttatggctcgatc
cgcgacaacattacgctcggtcgcccactttccgatgatcgtgaggtaatggatgcggcc
aaccgagcgggtgttacggtctttactcaacaagatcctgcggggctagaacgtcaagtg
ggtgaagggggtatgctgctctcgggtggtcaacgtcaatctgtgtcgattgcgcgcgct
ttccttggccgccctcccgtcttactgatggatgaacccaccagcgcgatggataaccgc
tcagaaatgcacattaagcaacaacttagccaactcaagccaagtgagacgctgatcctt
atcacccacaaaacctcgatgctggatgtggttgatcgcgttattgtgatggagaaaggc
tgcattattgccgatggtccaaagcacgaagtgctgaacgatctgcgccaaggtaatgta
cgcgcagtgcaatag
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