Vibrio cholerae O1 2012EL-2176: EN18_04700
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Entry
EN18_04700 CDS
T03389
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EN18_04700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcq03019
]
EN18_04700
Enzymes [BR:
vcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EN18_04700
Messenger RNA biogenesis [BR:
vcq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EN18_04700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Utp25_C
ERCC3_RAD25_C
HI1480
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AIT32107
UniProt:
A0A0H6FP43
LinkDB
All DBs
Position
2:complement(994794..996149)
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AA seq
451 aa
AA seq
DB search
MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL
ELLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRM
CKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQ
NLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKE
GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVAT
DIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIER
LTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKPKKVEGAGENKGSVAENKPKAGH
RGQPTGQARTAKKGGTHSEPKKPTKRPVRNG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggttttacctcgctcggtctgtctgcgccaatccttaaagctattgaagagaaagga
tacaacacgccttcaccgattcagttacaggctattcctgcggttttagcaggcaaagac
gtgatggccgcagctcaaactggcacaggaaaaacggctggctttacgctacctatttta
gaattgctggcaaaagggccaaaagttcgcgccaatcaagttcgtgctttaatccttacc
ccaacgcgtgaactggccgcacaaatccaagacaatgtcatgctctatggccgccatcta
ccgctcaagagcgcggttgtgtttggtggtgtgaaaattaacccacaaatgcagcgaatg
tgtaaaggtgcggatatcttagtggcaaccccaggccgcttaatggatctgtataaccaa
aatgcggtcaaatttgatcagttggaaattttggtacttgacgaagcagatcgcatgctc
gacatgggctttattcgtgacattcataagatactgaaattattgcctgaaaagcgccaa
aacctactgttttcagctaccttctcgaccgaaatccgtgagcttgccaaaggcttggtg
aataaccccgtcgaaatttcagtcagcccagccaactcaacggcaagaaccgttgagcag
tgcatttatcctgctgatgtgaaaaagaaaccggacatgctggtgaaattggtcaaagag
gggaattggcaacaagtgctggtatttatgcgtaccaagcatggtgccaaccgcttagcg
acctatctcaacgagcaaggtttaaccgcggccgcgattcacggcaataagagccaaggc
gcacgcacccgagcactggcggattttaaagcgggagaggtgcgtattctggtcgcaaca
gatattgcggcgcgtggcattgatatcccgcaactgcctcaagtggtgaattttgaattg
ccgaaaattgctgaagattacgtgcaccgaattggccgaacaggccgagcaggtgaagtc
ggtaaagcgatttctttggtgagtgccattgaagcaccggaattatttgcgattgagcgt
ttaacgcaagccttactgccccgtgtaaatttagcgggatttgagccgaccaaccaactc
cctgagtcaaaattagacactcgacctttgaagccgaaaaagcccaaaaagcctaaaaag
gtagagggagctggagaaaacaaaggcagcgtagctgaaaacaaacctaaagctggccac
cgaggccagcctacaggacaagctcgcacagcgaaaaaaggcggcactcattcggagccg
aaaaaaccgacaaagcgccctgttagaaatgggtaa
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