Vibrio cholerae O1 2012EL-2176: EN18_05485
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Entry
EN18_05485 CDS
T03389
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EN18_05485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_3_3
DUF4165
Big_3_2
PKD
PKD_4
Motif
Other DBs
NCBI-ProteinID:
AIT32259
LinkDB
All DBs
Position
unnamed:82441..87927
Genome browser
AA seq
1828 aa
AA seq
DB search
MINFKPKIPAMLGALAVLTAGAAHAELLEYTFKAPDGTQRSLTPNANYANPTGNISFALS
AGIDRKVKISVLRSDGTVVSTATSHLLGATDRITVGGKSYYGAELQLPAPVGGAYTIRAE
ILASDGSTVQTDEYPLTVDVTPPTYSSLAPVYSNYGQVTSGDVWKLGLGGSEDNAFLLSG
ISDESPIKGVKAKLYRQDGSLYKDVSVNYDDANGQARQSFQSGFFPASDLDEVFTLQFEI
SDSAGNSYLSPRQKVMFDSITNAPSAPFGVYDPSSTNNLGPGLTGFVAYTEGMTVKTNPI
KLAWRVPRDNWHEYREGGINMTNALGEMSKVGEDASYVYLVTTAPYGNTDGNYWRWVNFG
QWGGGGIAYNLTLSPSAPKSPRLLGVDYNYSDIGWSSFYRYWVNNSVLPVTVSSIRVKVE
PRPYVQTAVHRGSCEIPVGQDSCVIANSFTMAKGTTGYVHDNATVFNPDKSLRSNPLWAE
VNWNDQHYPQLSQQFDQNSKVFTLFVNQPGRGAYFDRLRLRSAWIEDSKGNKLSPTGGLI
ANNWENYTYQWDLKTLPEGQYSLVAAAEEMHGPLTRQPMFQITSDRTPPTMTLSVADGAA
IQTLDDVVITLADAIDPSPKLTSIALVGGPANDKVQLSWREESKGRFRLEYPVMFPSLKE
GESYTLTVSGEDAQGNAVQKAVGFEYKPRQVMLADGMDGKVMVPAVTHEFVHADGKRIIE
TKPLTLSDGAVVTGSYDVFATLRSDAKVPLVVNGVRIEPGQTMGIMSQHDFGASGGRLSI
PVKPAVPDVVGSSSLLVMTSAPNSPILVVDINTWKGTAKLSAESWTIRQVIDPVKIYALP
ESGVPCRFTTKEDVAMAADPIRDPVCLLQWDRTPDEAEQTTQDNNGMKVAGLVGQAVSIG
EQPVEYSLYLFSGDGSKVKVGSGSQNLTVTTAYGSVGYTPIDDIAQVNRVIEDFDVNFKQ
SKGPDCSITLSADRAKKEAANKAVGSASRACLFEWQQIPDGLVQDPLSESPSLSGSLASN
GVHPLGWRVSIFTRNGTRVTLNDETFNVEAVDPPAPTVELASDYNFKDNIYLVPMTGNYL
GDAIINSERADLDIAISRNSDVLESETFTPGWGATNKVYRRINTDERALWEETTYKVNAA
YNKVPDVKTEVVYRAISAPSDSIRPIVEVKGDTAIDTQALPVRVLIRDQYKPDGDYDANT
MGVWKVRLIQQKAYNETVALTDYAEASNGEAQFSVDLSGVDTSSVRIAAEAVLESPVEGY
NRTELSIRPAFLTVLRGGAIGAGVEARKLSGEAPFTAVFKLSLDDRQDLRATGQVVWETS
KDDGKTWEQFIPEDRYKYQLVKTFDKGEYQVRAKVVNVNSGAEKYTEAVSVVAYDKPDIA
VIGPTTLFVGSEGKYTANLTLNDEPISGGNAIVEWSTDGGKTYAQTGDSITLSSDEETRY
RLWARVRSATAPADDGYAYEVAKTAVDFRAVKAPRPYVTGPRVIETGKKYVFKAETSLPY
RGMDVKLNGFFTLPDGSIVQGDTAEYEPSDTDLNQATVETKYTTWIEGYRDQGAEASHSL
RSRVWQYVWPSFGMQVRKNADVAPATITASVRPIAFNGKLEEPTYEWELPEGAVIQDQRQ
DIVRSFVINEPGDYNIKVTVRDARGHETVIEQPLKIGQAAPYAIDLQYSGSNKYEREPLD
VLLRPYISGGHPRDRISTRVYSVDGTPLESSGYYGRATLGAGEHSIKLKITSEMGHEAEG
EVNINVAENKLPACSLSSRETVGSWIVYANCEDTDGRMKSYEWTIAGELQSISSDRVTIS
KGTYETMPTISLVGVDDSGGKSEAVTMN
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatttcaagcctaaaattccggcgatgcttggggctctggcggttcttaccgct
ggtgctgctcatgcagagctgctggaatacacctttaaggctccagatggtacgcaacgg
tctctgactccgaatgccaactatgccaacccaacgggcaatatctcgtttgccttgagt
gccggtatcgaccgaaaggtaaagatttcggtgcttcggtcggatggaacagtggtttcg
acagcgaccagccaccttcttggggctactgatcgcatcacagtgggtggaaaatcctac
tatggtgcggaacttcaactaccagctccagttggtggggcatacactatcagggcggaa
attcttgcctctgatggttctacagtacagacggatgaataccctcttactgtcgatgtg
acgccgccaacctactcttcgcttgccccggtttatagtaactatgggcaggttactagc
ggtgatgtttggaaactgggtctaggtggctctgaggataatgcctttttgctgtcagga
atctctgatgagtcacccatcaaaggcgtcaaagcaaagctgtatcgtcaagacggttca
ctctacaaagatgtatccgtgaactacgatgacgctaacggacaagctagacagtctttc
caatctggctttttcccagcctctgacttggatgaagtgtttacacttcagtttgagata
agcgatagcgctggaaatagctatctttcacctcgtcaaaaagtgatgtttgatagcata
accaatgctccgtctgcaccttttggtgtttatgacccttcaagtacaaacaacttaggc
cctggattaaccggatttgttgcttacactgagggcatgacagttaaaactaacccaatc
aagttagcttggcgtgttccgcgtgataactggcatgagtatagagaaggtgggataaat
atgaccaatgccttgggagagatgtccaaggtaggagaagatgccagctatgtttatctc
gtcacaaccgcaccttatggcaataccgacggcaattattggcgttgggtgaacttcggc
cagtgggggggaggcggtattgcttataacctcacactctctccatcagcgcctaaaagt
cccagacttttgggtgtggactacaattacagtgatataggatggtctagtttttaccgc
tactgggtgaacaattctgttcttcctgtcactgttagtagtatccgtgtcaaagttgaa
ccaaggccttacgttcaaactgccgttcacaggggaagctgtgaaattcctgttggtcaa
gatagctgcgtgattgcaaatagcttcacaatggctaaaggcacaacagggtacgtccac
gataatgcgacagttttcaatccggataaatctcttcgctcgaatcctctttgggcagag
gttaactggaacgatcagcactaccctcagctaagtcagcagttcgatcaaaatagcaag
gtatttaccttattcgttaaccagccaggacgaggcgcttactttgataggctgcgtctg
cgaagtgcatggattgaagatagcaaaggcaacaagctgtctccaactggtgggttaata
gccaacaactgggagaactacacttaccagtgggatcttaaaactctccctgaggggcaa
tacagtcttgttgccgcagcagaggagatgcacgggcctttaacgcgacaaccaatgttc
cagataacgtctgatagaacgccaccaaccatgacactcagtgtggcagatggagcagct
atccagactctagatgatgttgttattaccttggctgatgctatcgacccttcacctaaa
ttgacctctattgcccttgtaggggggcctgccaatgacaaggtgcagttgtcttggcgt
gaggagtcgaaaggtcgattccgccttgagtacccggtaatgttcccttctttgaaggaa
ggggaatcttacacgctgactgtttccggtgaggatgcacaaggcaatgcggttcaaaag
gctgttggcttcgagtacaaacctcgtcaggtaatgctggcggatgggatggatggcaag
gtcatggtccccgctgtcactcatgaatttgttcatgcagatggcaaacggatcatcgaa
accaagccgctgacgctcagtgatggtgctgtcgtgacaggttcatacgacgtgtttgcg
accctacgttctgatgcgaaagtaccgctggtggttaatggggtgcgtatcgagccaggc
cagacaatggggatcatgagccaacatgatttcggtgcgtcaggtggtcgtttgagcatt
ccggttaaacctgctgttcctgatgtggtcggctcttccagccttcttgtcatgacctcc
gcgccgaactcacccatcttggttgtggacatcaatacctggaaagggacggctaagctc
tctgctgaatcatggacaattcgccaggtcattgacccagtgaaaatctatgccctgcca
gagtcgggtgtgccttgccggttcaccacgaaagaggatgtggctatggccgcagaccca
attcgtgacccggtgtgtttgctccagtgggacagaactccagatgaggctgaacaaact
acgcaggacaacaacgggatgaaagttgctgggctggtggggcaggctgtgagcattggt
gaacaacctgtcgaatacagcctgtacctgttcagtggtgacggttccaaggtaaaagtt
gggtctggctctcagaacctgacggtaactactgcctatggctctgttggctacaccccg
attgatgacattgctcaggtgaatcgcgtcattgaagattttgatgtgaacttcaagcag
agcaaggggccagactgttctataaccctcagcgcagaccgtgcgaaaaaagaggccgcg
aacaaggctgttggtagtgcaagccgtgcctgtctgttcgagtggcagcagatccccgat
ggattggtccaagacccgttatcggaatcaccttcgctctctggttcattggcctccaac
ggcgttcatccactggggtggcgggtaagtattttcacccgtaacggcactagggtgacg
ttgaacgacgagactttcaatgtcgaagcggttgacccaccagctccgaccgttgaacta
gcctccgactacaacttcaaagacaacatctacttggtgccgatgacaggtaactacctg
ggtgatgccattatcaactctgaacgagctgatctggatattgccatatcgcgcaactcg
gatgttcttgagtctgagaccttcactccgggatggggtgccaccaataaggtgtatcgc
cgcatcaataccgatgagcgagcgttgtgggaggagaccacctacaaggtgaacgcggcc
tacaacaaggtgcctgatgtgaagactgaggttgtctaccgggctatctctgcaccttct
gacagtatccgtcctatcgttgaagttaaaggtgataccgcgattgacacccaggcattg
ccggttagggttctcatccgtgatcagtacaaacctgatggtgactatgacgctaacacg
atgggggtgtggaaagtacgcctgatccagcaaaaggcctacaacgagacggttgcgctc
actgattatgcggaagcatcgaacggtgaagctcagttctcagtagacctgtctggtgtg
gatacttcctccgtccgtatcgctgctgaggctgttctggaaagccctgttgagggttac
aaccgcacagagttgtctatcagacctgccttcttgacagtgcttcgcggtggtgccatc
ggtgctggcgtggaggctcgcaagttgtctggtgaagctccgttcactgctgtgttcaag
ctatctttggacgaccgtcaggatctccgggctaccggccaggttgtgtgggaaaccagt
aaggacgacggtaaaacctgggagcagttcatcccagaagatcgatacaagtatcagctt
gtgaagaccttcgacaagggggagtaccaggttcgggccaaggtggtgaacgtcaactca
ggtgcggaaaagtacaccgaagcggtcagtgttgtcgcttacgacaaacctgatattgct
gttatcggcccgaccacgttgtttgtcggaagtgaaggcaagtacacagcgaacctgacg
ttgaacgatgagccaatctccggtggcaatgccattgttgagtggtctactgacggtggc
aaaacctacgcgcagacaggggatagcatcacgctttcgagcgatgaagaaacccgatac
cgcctgtgggctcgtgtgcgctctgccacggcaccggctgatgacggctatgcctatgaa
gttgcgaaaacggcggttgacttccgagcagtgaaggcacctcgtccttacgtgacaggg
ccgcgagttattgagaccggtaagaagtatgtgttcaaagccgaaaccagcctgccttac
cgtgggatggacgtgaagctgaacgggttcttcacgctgcctgatggctcgattgtgcag
ggtgatactgctgagtacgaaccctctgacactgacctcaatcaggctactgtagaaacg
aagtacaccacctggatcgaaggataccgagatcagggtgcagaggcttcgcatagccta
cgctcccgcgtttggcagtatgtatggccgagcttcggaatgcaggttaggaagaacgca
gacgtggctcctgcgacgatcaccgcgtcagtgcggccaattgccttcaacggcaagctg
gaagagccgacctacgagtgggagttgccggaaggcgctgtgattcaggatcagcggcag
gatattgtccggtcctttgtgatcaatgagccgggtgattacaacatcaaggtcactgtc
cgtgatgctcgcggccatgagaccgtgatcgagcaaccgctcaagatcggccaggcagcg
ccctatgccattgacctgcaatactctggctcgaacaaatacgagcgtgagcctctggat
gtgctgttgcgaccgtacatttctggcggccacccacgcgaccgtatttcgactcgtgtt
tattcggtagatggtacaccgttggaaagcagtggttactacggcagagcaactctgggc
gctggtgagcacagcatcaagctgaaaataacctcagaaatggggcatgaagctgagggc
gaggtgaacatcaatgttgcagagaacaagttgcctgcatgtagcctgagctcacgagag
accgttgggtcgtggatcgtctatgcgaactgcgaagataccgatggccgcatgaagtcc
tacgaatggaccattgccggtgagttgcagagcatcagctctgatcgagtgactatcagc
aagggcacctatgaaacgatgccgaccatctctctggttggggtcgatgactctgggggc
aaatccgaagctgttaccatgaactaa
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