Vibrio cholerae O1 2012EL-2176: EN18_06050
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Entry
EN18_06050 CDS
T03389
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EN18_06050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcq02000
]
EN18_06050
Transporters [BR:
vcq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EN18_06050
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIT28615
UniProt:
A0A085SLP2
Structure
PDB
PDBj
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Position
1:complement(35319..36989)
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AA seq
556 aa
AA seq
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MLANIKKTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNLRTTTDFI
YEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLL
KAKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEISLIPIVAEHVWKDVKDPTT
FTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGKIVNS
ELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFS
MALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKA
GFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVY
NQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSGDGMPRFAMHYFTDKKLDGLLDSF
YKTADKNEQLAIAHGIQKIIAENQVTIPVMSGAWMYQYNTTRFTGWWSEENPKGRPSVWA
GIPERLLHVLDLKPVK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccaatattaaaaagacagcactagccgccgcagtaatcgcagcagcaaccagt
gtttcagctccagcgtttgcacgtagtgagctcaccatcgtgccagatttctaccctaca
atggtacgtaacttcaacccgtacttagcgactaacctgcgtacaaccaccgactttatc
tatgaacctctggttgtattcaatgaaatgaaaggtaatacgcctgttttccgtctggca
gaaagctacaaaatggctgacgacctgatgagcgtgactttcgatatccgcaaaggcgtt
aagtggtctgacggtgaagcattcacagctgacgacgtggtttactctttcggcctgctg
aaagcgaaaccagaacttgatcaacgtggtatcaacaagtgggttaccagcgttgagaaa
gttgacgaatacaaagtgcgtttccgtttgtctgaagcaaactcaaacgtaccttatgaa
atttctctgatccctatcgttgctgagcacgtgtggaaagacgtgaaagatccaaccacc
ttcactaacgaaaatccagtaggtactggtcctttcaccgtgatcgacactttcactcca
caactgtacatccagtgtcgtaacccgaactactgggatgccgctaacctagaagttgac
tgtctgcgtgttccacaaatcgcaaacaacgaccaactactgggcaaaatcgttaactct
gagctcgactggacttcttcattcgttccagatatcgaccgtacttacgccgcagcgaac
cctaaccaccactactggtatccagcagcgggtactcaggcgttcatggtgaacttcaaa
aacccagatcctgcgaaaaaagaagcactggataacgtagatttccgtcgtgcgttctct
atggctctggatcgtcaaaccatcattgatatcgccttctacggcagcggtactgtgaac
gacttcgcatctggccttggctacgcattcgaagcatggtctgatgaagcgacccacaaa
aagtacaaaggcttcaacacttatgacgttgaaggctctaagaagctactggcaaaagcg
ggcttcaaagatgtgaacggtgacggtttcgttgaaactccatcaggcaaatcttttgaa
ctgctgatccaatctccaaacggctggactgactttaacaacacagttcaactggcggtt
gagcagctacaagaagtgggtatcaaagcgaaagcacgtactcctgaattcgcggtttat
aaccaagcgatgctagaaggtacttacgacgttgcgtataccaactacttccacggcgct
gacccattcacttactggaacagcggctacaactcagctctacaatctggcgacggtatg
ccacgctttgcgatgcactacttcaccgataagaagcttgatggtttgctagacagcttc
tacaaaacagcggacaagaacgagcagttagcgatcgctcacggtattcagaagatcatt
gctgaaaaccaagtgactatccctgtaatgtctggtgcatggatgtatcagtacaacacc
actcgtttcactggctggtggagcgaagaaaatccgaagggccgtccaagcgtttgggct
ggtatcccagagcgtctactacacgtactggatctgaaaccagttaagtaa
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