Vibrio cholerae O1 2012EL-2176: EN18_06920
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Entry
EN18_06920 CDS
T03389
Name
(GenBank) Norspermidine sensor
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EN18_06920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcq02000
]
EN18_06920
Transporters [BR:
vcq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
EN18_06920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AIT28785
UniProt:
A0AAW4KV66
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Position
1:complement(226026..227066)
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AA seq
346 aa
AA seq
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MIKRFLSLMVLNTVCYQASALELNVYLWEDTIAPSVVEAWHKKTGVSVNLFHFDNDDERS
LLMLKSVQLPFDIMVLDNVSAFIFSRQNVFEDLTALPNRANNDPMWLQACGTHAVPYFWG
SVGIAYRKSLFDKPPTQWSEVVDIAPAHRGRVGMLKDSVETLLPALYMLNASPITDSIDT
LRQAYRLLDAANPHILTYEYVLSYVRSHPQTDNLHMAVSYSGDHYSLNRFFNTQDWDFSV
PEGRPYLWVDCMAVNSVSPNTVQAKAFLDFLMKPDIAAINAEYIRAASPNYKARALLPVE
HREDLSIYLPEQRLAEGIIDSELSAKNLSLRAKIISSVTYQYEAKP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgctttctgtcgctgatggtattgaatactgtctgttatcaagccagcgct
ttggaactgaatgtctacctttgggaagatacgattgcaccaagcgtagttgaggcatgg
cataaaaaaaccggcgtctccgttaatctcttccatttcgataatgatgatgaacgcagt
ttattaatgctcaaaagcgtacaactgccctttgacatcatggttttggataacgtctcc
gcgttcattttctcaaggcaaaatgtttttgaagatctgaccgcccttcccaatcgtgcg
aataatgaccctatgtggctacaagcttgtggcacccatgcggtaccttatttctggggc
tcagtcggcattgcctatcgcaaaagcttgtttgataaacctccaacgcagtggagtgag
gtcgtcgatatcgctccggcgcatcgtggacgagtgggtatgcttaaagacagtgtcgaa
acactactgcctgcactatacatgctcaacgcctctcccattaccgattctatcgacaca
ctaaggcaagcgtatcgtctcttagacgccgccaatccccatatcctgacttatgagtat
gtattgagctatgtacgcagccacccacaaaccgacaatctacatatggcggtctcttac
agtggcgatcactattcactgaaccgcttcttcaatactcaagactgggactttagcgtt
ccagaaggccgcccttatttgtgggttgattgtatggccgtaaatagcgtttctcccaac
acagtgcaagccaaagcttttttggatttcttgatgaaacctgacattgccgcaatcaat
gccgaatatattcgagctgcaagcccgaactacaaagcacgcgctttgctccctgtagag
caccgagaagatctctcgatttatctcccagagcagcgattggcggaggggataatcgac
agcgaactctcggcgaaaaacctcagtctgcgtgccaaaatcatcagcagtgtgacttac
caatatgaagctaaaccatag
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