Vibrio cholerae O1 2012EL-2176: EN18_12690
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Entry
EN18_12690 CDS
T03389
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcq03032
]
EN18_12690 (ihfB)
03036 Chromosome and associated proteins [BR:
vcq03036
]
EN18_12690 (ihfB)
03400 DNA repair and recombination proteins [BR:
vcq03400
]
EN18_12690 (ihfB)
DNA replication proteins [BR:
vcq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EN18_12690 (ihfB)
Chromosome and associated proteins [BR:
vcq03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EN18_12690 (ihfB)
DNA repair and recombination proteins [BR:
vcq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EN18_12690 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF4777
HU-CCDC81_euk_2
Glycos_trans_3N
HU-DNA_bdg
HAAS
Ybfg_C
Motif
Other DBs
NCBI-ProteinID:
AIT29896
UniProt:
A0A1X1LIF6
LinkDB
All DBs
Position
1:complement(1532483..1532761)
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AA seq
92 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKNILEHMASTLEAGERIEIRGFGSFSLHYREPRV
GRNPKTGDKVELEGKYVPHFKPGKELRERVNL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtccgaactgatagaaagactctgtgccgaacaaacgcacttgtctgcgaaa
gagatcgaagatgcggtaaaaaatatccttgagcatatggcctcaacgttagaagcgggg
gagcgcatcgagattcgtggtttcggtagcttttccttacactatcgtgagccgcgtgta
gggcgtaatcctaagactggcgataaggtggagttggaaggtaagtacgttccgcatttc
aaaccaggtaaggaactacgcgaacgcgttaacttgtaa
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