Vibrio cholerae O1 2012EL-2176: EN18_14165
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Entry
EN18_14165 CDS
T03389
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcq02000
]
EN18_14165
Transporters [BR:
vcq02000
]
Other transporters
Pores ion channels [TC:
1
]
EN18_14165
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AIT30168
UniProt:
A0A0H5Y4A0
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Position
1:complement(1831262..1833325)
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AA seq
687 aa
AA seq
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MAVLCPARVSVAENKKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQ
RSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVG
GLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGAIV
MKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAAFE
PAGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINVAGNEAFRPVYET
ASFTTAWDIIWHLNDLFTFENNLVYADFSYDRYTNPNSRGDFNTDGKEFHIEPLLRYIAL
DGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAKSVFAEVTYALTPSINVNLAGRFE
REQVKRNVSHPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLAFNSM
QFTGFRPYEFEQESIWNYEFYTRHRFSHSVEVLTNLFYNDFDSMQMTQTTSSGDVFIANL
DEASTYGAEIGSRWYATSSLELFANLGLLKTEFKETTGNTKELPRAPKMSANVGLLYDFG
QGFEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYVFEHGRATLYATNLLDSDKTT
LYLSTNNTLDQLKQQPRMIGASVQLNF
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcagttttatgcccagcgcgagtcagtgttgcagagaacaaaaagtttaaattgcac
accttgtcggcgatgatgatggggcttttcacgggcagttttgcctatgcggaaacgcag
aatacgagtaatcaagagcaagaaatgcccgtgttggtcgtgattggcgaaaaaacacaa
cgcagcatttatgagacgagcgcgagtgtcgaagtgtttgatcaagacacgattgagaga
acacccggcgcaacagagattgatgatctcctacaactgatcccaaaccttgtcgattcg
ggtcaaagcaacaatatgcccacgattcgaggtatcgatggctcggggccttccgttggg
ggcttggccagttttgctggcacatcacctcgcttaaatatgtcgattgacggtcgttcg
ctgacttattctgaaattgcttttggccctcgttcactctgggatatgcagcaagtggag
atctatttagggccacagagctacattcaagggcgaaatacctcggcgggcgcgattgtg
atgaagtctaacgaccctactcatcattttgaaagtgcggtaaaagcaggtattggcgaa
agcgattattcgcaaacagcgggtatgatctctgcacctattattcaagatgagttggca
tttcgtttgagttttgatcagcagaagcgggatagttttgtcgatcttgctgcttttgaa
cccgcgggcgatcctaaaaaaatcgagatgaattcggtgcgcggtaagctgctgtacgaa
ccttccgcactggatggttttaaaaccacgttaacgctctctcatatggattctcgtggg
ccacaaacagaaaacattaatgtggcgggtaacgaagccttccgaccggtttatgagaca
gcctcgttcacgacggcgtgggatattatctggcatctcaacgacctcttcacttttgaa
aacaatctggtgtatgccgatttcagctatgaccgttataccaatcccaatagccgaggg
gatttcaataccgatggtaaagaattccatatcgaaccgttattacgctatatcgcactg
gatggtagcgtgaatacgctgattggggcgcgttactaccaatcttcacaggatgatatg
tacattgatgcggccagtgcatatccgatggatggtcgcactaaagccaaatccgttttt
gcggaagtcacttatgcgttaacgccttctatcaatgtgaatttggctggccgatttgaa
agagagcaggttaagcgaaacgtctcgcacccaagatacaagcttgattacgatgaaaca
tccagcgtatttttgcctaagctcgatgtggcatatacaccagtgcaagggcagacctat
gggattaaagcggctaaaggttacaatgcgagtggggcaggactagcctttaactcgatg
caatttacaggttttaggccctacgagtttgaacaggaatcgatttggaactatgagttt
tacacccgtcaccgtttcagccattctgtcgaagtgttgactaaccttttctataacgat
tttgacagtatgcagatgacgcaaaccacatccagtggtgatgtgtttatcgctaacctt
gatgaagcgagcacttacggcgctgaaatcggatcacgttggtatgcgacctcttcactc
gaactttttgccaacctagggcttttgaaaaccgagttcaaagaaaccaccggaaacacc
aaagagctgcctcgagcaccgaaaatgtcagccaatgttggtctgctttatgattttggc
caagggtttgagttcagtagtaatgcggcttataccggaagctatttctcggagagtggc
aattcagaaaaatttgcgattgactcatattgggttgccaatgctcagttagcctatgtt
tttgagcatggacgagcaaccttgtatgccactaacttattggattctgataaaacaacg
ctttatctctcaaccaataatacgcttgaccaacttaaacagcagcctcgcatgattggt
gcatcggtgcagttgaatttctaa
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