Vibrio cholerae O1 2012EL-2176: EN18_15345
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Entry
EN18_15345 CDS
T03389
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcq03019
]
EN18_15345 (rnc)
03009 Ribosome biogenesis [BR:
vcq03009
]
EN18_15345 (rnc)
03036 Chromosome and associated proteins [BR:
vcq03036
]
EN18_15345 (rnc)
Enzymes [BR:
vcq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EN18_15345 (rnc)
Messenger RNA biogenesis [BR:
vcq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EN18_15345 (rnc)
Ribosome biogenesis [BR:
vcq03009
]
Eukaryotic type
90S particles
RNase
EN18_15345 (rnc)
Prokaryotic type
rRNA processing factors
EN18_15345 (rnc)
Chromosome and associated proteins [BR:
vcq03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EN18_15345 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AIT30398
UniProt:
A0A0H4JNQ8
LinkDB
All DBs
Position
1:complement(2114045..2114722)
Genome browser
AA seq
225 aa
AA seq
DB search
MTPPMNKLTSKLGYTFKETELLNLALTHRSANGKHNERLEFLGDSILSFVIADELYRRFP
KVNEGDMSRMRATLVRGNTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDLETARSIVLEWYHGRLEEIKPGASQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVACEVAGMDTPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgacacctccaatgaataaattaacaagtaagctcggttatacctttaaggagactgag
ctgcttaatctggcgctgacacaccgcagcgccaatggtaagcacaatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcattgctgacgagctctatcgccgcttcccg
aaagtgaatgagggagatatgagccgcatgcgtgccaccttagtgcgtggtaacacgttg
gcggagctgggtcgtgaattcgatctgggagattacttaaaattaggtccaggtgagttg
aaaagtggtggttttcgccgagactcgattctagcggatgcggtggaagcgatcatcggt
gcgatctaccttgacagcgatctggaaacggcgcgcagcattgtgcttgagtggtatcac
ggtcgtctggaagagattaaaccgggcgcatcacaaaaagacccgaaaactcgcttacaa
gagtttttgcagggcagaagaaaaccgctgcccgtctacacagtgactaatattaaaggt
gaagcacacaaccaagagtttaccgttgcgtgtgaagtggcaggtatggatacgcctgtg
atcggtaaaggcaccagccgccgcaaggcagagcaagcggctgcagaaacggctctggag
caattgaccaatggctga
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