Vibrio cholerae O1 2012EL-2176: EN18_17860
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Entry
EN18_17860 CDS
T03389
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq03420
Nucleotide excision repair
vcq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EN18_17860 (uvrD)
03430 Mismatch repair
EN18_17860 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcq03400
]
EN18_17860 (uvrD)
Enzymes [BR:
vcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EN18_17860 (uvrD)
DNA repair and recombination proteins [BR:
vcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EN18_17860 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EN18_17860 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
AIT30859
UniProt:
A0A0H6EAJ5
LinkDB
All DBs
Position
1:2620160..2622331
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AA seq
723 aa
AA seq
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MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMA
VTFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQ
QRLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFDPVTQTYLKLYTAYQEA
CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ
SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN
SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS
RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD
KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL
TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAAL
EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS
QTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL
EKV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccctctctattgctcgacggtctcaacgataaacaacgcgaagcggtggca
gcgccactggaaaacttactgattttggccggtgctggcagtggtaaaacccgcgtactg
gtgcaccggattgcgtggctgatgtcggtggaagaagcctcaccgttttcggtgatggcg
gtgacctttaccaacaaagctgcagccgaaatgcgtggccgaattgaagagctgatgcat
ggcaccgcctctggcatgtggtgtggtactttccacggtatttgccatcgtattctgcgc
gcccattatctcgacgctaagctgctggaagattttcagatcatcgacagtgacgatcag
cagcgtctgctcaaacgcctcatcaaagcgcacaatctggatgataaacagtggccggca
cgccaagtcgcgtggtggatcaacaatcaaaaagatgaaggattgcgcccgacgcacatc
aacgcctttgatccggttactcaaacttatctcaagctgtacaccgcttaccaagaagcg
tgcgatcgcgccggcttggtcgatttcgccgaaattttgctgcgcgccctagagcttctg
cgtggtaatcagcacattcgcgagcattatcaggcgcgctttaagcacattttggtcgat
gaattccaagacaccaacgcgattcagtacgcgtggctacgtatgatggcgggtgctcag
tcgaacgtgatgatcgtgggtgacgatgaccagtcgatttacggctggcgtggcgcgcga
gtggaaaacatcgaaaaatttacccgcgaattcccgagcgtgaataccattcgactggag
caaaactaccgctccaccaaaaccattttggaagcctcaaatacactgatcgccaataat
agcgagcggatgggcaagcagctatggactgacggtttggtcggcgaacccatttcggtg
tactcggcgtataacgagctcgatgaagcacgctttgtggtcagcaaaatcaaaggctgg
caggagcagggcggcacactgaccgattgcgcgatcttgtatcgcaacaacgcccagtcg
cgggtattggaagaggcattattgcaagcgagtttggcctaccgcatttatggcgggatg
cgctttttcgagcgccaagagatcaaagatgcgctgagttatctgcgtttgattaataac
cgcaatgacgacaccgcctttgagcgagtgattaatacgccgccgcgcggtttgggtgat
aaaaccctagagaccattcgctttgccgcgcgcgatcgtggctgcaccttgtgggatgcc
agtgtcggtctgctcaatgaccaagtgctcactgggcgtgctgcgagcgcgctgagccgc
tttgttgaactgatcaacgccttggaagaggaaggcatcgacatgccgctgcatgtgctc
acggaccacgcggtaaaaacctctggtctgctggagatgtatcagcaagaaaaaggcgaa
aaatccaaagcgcggattgaaaacttggaagagctggtgacggcgacgcgccagtttgaa
aagccagaagaagcgcaagagatgaccatgctgaccgcatttttgacccatgcggcactg
gaagccggtgaaggtcaagccgatgagcatgatgatgcggtacaactgatgaccttgcac
agtgccaaaggattagagtttccgctggtgtttatggtcggtgtggaagagggtatgttc
ccgagccaaatgtctgccgaagaggcggggcgtctcgaagaggagcgtcgcctgtgttac
gtcggtatgacccgcgcgatgcaaaagctctacatcacctacgcggaaatgcgccgtttg
tacgggcaagataagtatcacaaaccctcacgctttattcgtgaactgccagaaggctgt
ttggatgaagtgcgcatgaaggcgcaagtcagccgtccaaccagtacagggcgctttagc
caaaccgtagtcaaagaaagctttaacgaaaccggttttaatttgggctcacgagtccgt
cacccgaaatttggtgaaggcaccatcattaactttgaaggcagtggcccgcaaagccga
gtgcaagtggcgtttaatggcgaaggcattaagtggttagtcacggcttacgcgagatta
gagaaggtgtag
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