Vibrio cholerae O1 2012EL-2176: EN18_19905
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Entry
EN18_19905 CDS
T03389
Name
(GenBank) LuxR family transcriptional regulator
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Pathway
vcq02020
Two-component system
vcq02024
Quorum sensing
vcq05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EN18_19905
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EN18_19905
05111 Biofilm formation - Vibrio cholerae
EN18_19905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcq03000
]
EN18_19905
Transcription factors [BR:
vcq03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EN18_19905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_11
LacI
Motif
Other DBs
NCBI-ProteinID:
AIT31210
UniProt:
B2CKP3
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:complement(3035368..3035979)
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AA seq
203 aa
AA seq
DB search
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPT
REDLVDDVLNFVVRQYSNFLTDHIDLDLDVKTNLQTLCKEMVKLAMTDCHWLKVWFEWSA
STRDEVWPLFVSTNRTNQLLIRNMFMKAMERGELCEKHDVDNMASLFHGIFYSIFLQVNR
LGEQEAVYKLADSYLNMLCIYKN
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcaatcgaaaaacgccctcgaactcggctatcgcctcaaaaacgcaaacta
caactgatggaaatcgcgttggaagtgtttgctaaacgcggcattggtcgtggtggtcac
gcagatattgccgagattgcgcaagtctccgttgcaacagtgttcaactacttcccaact
cgtgaagacttggttgacgatgtgctgaattttgtggttcgtcagtactccaacttcttg
accgatcacatcgatcttgatttggatgtgaaaaccaacctacaaactctgtgcaaagag
atggtgaaattggcgatgaccgattgtcactggctcaaagtctggtttgagtggagtgct
tcaacccgtgacgaagtttggccactgtttgtttccaccaaccgaactaaccaactgctg
atcagaaacatgtttatgaaagcgatggagcgtggcgaattgtgtgagaaacacgatgtc
gataacatggccagcctgttccacggcatcttctactccatcttcttacaagtgaaccgt
ttaggtgaacaagaagcagtgtataagttggccgatagctacctcaatatgctgtgtatc
tataagaactag
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