Vibrio cholerae O1 O395: VC395_0026
Help
Entry
VC395_0026 CDS
T02099
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vcr
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcr03016
]
VC395_0026 (trmA)
Enzymes [BR:
vcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
VC395_0026 (trmA)
Transfer RNA biogenesis [BR:
vcr03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
VC395_0026 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_31
MTS
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_12
Methyltransf_15
DREV
PrmA
Motif
Other DBs
NCBI-ProteinID:
ACP08055
UniProt:
A5F4M4
LinkDB
All DBs
Position
I:31659..32768
Genome browser
AA seq
369 aa
AA seq
DB search
MATLDVNPELYQAQLADKIARLKAMFVDYSMPELEVFESPVANYRMRAEFRIWHEGDDMY
YIMFNQETREKYRVDQFPAASRLINDLMPLLMDAMKGSPILRHKLFQVDFLSTLSGEILV
SLLYHRQLSEEWITAAQALKQRLNDEGFNLNLIGRARKMKVVLDRDYVVENLQVNGQPYV
YKQVENSFTQPNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVEAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFV
DPPRSGMDIDTCKMVQGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHME
AGVMLERKK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgatgtaaaccctgaactctaccaagctcaattggcagacaaaatcgcc
cgtttaaaagcgatgtttgttgattactccatgcctgagctggaagtgtttgagtcgcca
gtggcgaattatcgtatgcgtgctgaatttcggatttggcatgaaggcgatgacatgtac
tacatcatgtttaatcaagagacgcgcgaaaagtaccgcgtggatcaatttccagcggcg
agccgcctgattaacgatttgatgcctctgctgatggatgcgatgaaaggcagccctatt
ctgcgccataaactgtttcaggttgatttcctctcaaccctcagtggcgagattttggtt
tcactgctgtaccatcgacagctcagcgaagaatggatcactgcggcgcaagcactcaaa
cagcgcctaaacgatgaagggttcaacctgaacttaatcggccgtgctcgcaaaatgaaa
gtagtgctggatcgtgattacgtggtggagaatttacaggtcaatggccagccttatgta
tataagcaagtcgaaaacagttttacccaacctaatgcgaaggtcgccgaaaaaatgttg
gagtgggcggtcgattgtactcaagagagcaagggggatttgcttgaactgtattgcggt
aacggcaacttctcactcgcgttagcgcaaaactttgagcgtgtactggcaaccgaatta
gccaaaccttctgtagaagccgcgcaatttaatattgccgcgaaccagatcggcaacgtg
cagatcattcgcatgtcagcagaagagtttactcaggcgatggaaggtaaacgcgaattc
aatcgtttgaaggatgcgggagtcgatctgcaaagctaccgttgcaacactatttttgtc
gacccaccacgctcaggcatggatatcgacacttgtaaaatggtgcaaggttatgagcgc
attctgtacatctcttgtaacccagaaacgctgcaagagaacttacaagtcttgggggaa
acccatcaagtggtgcgctttgctctcttcgaccaatttccttacacccaccacatggaa
gcgggcgtgatgttagagcgcaaaaagtaa
DBGET
integrated database retrieval system
