Vibrio cholerae O1 O395: VC395_0166
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Entry
VC395_0166 CDS
T02099
Symbol
recF
Name
(GenBank) recF protein
KO
K03629
DNA replication and repair protein RecF
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VC395_0166 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcr03400
]
VC395_0166 (recF)
DNA repair and recombination proteins [BR:
vcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VC395_0166 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_29
AAA_27
SHE3
ABC_tran
AAA_16
DUF2813
cobW
AAA_22
AAA_13
Motif
Other DBs
NCBI-ProteinID:
ACP08193
UniProt:
A5F493
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Position
I:complement(165593..166684)
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AA seq
363 aa
AA seq
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MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI
IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ
LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRELS
YWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSILE
KNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELTGK
QCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESSKTFHVAHGVI
EQG
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgccgctttcccggttaatgatccaacagtttcgtaatattaaagcctgtgatattcgc
ctatcagcaggctttaactttcttatcgggccgaatggcagcggtaaaaccagcgtgctt
gaagcgatttatctgctcggccatggccgttcatttaaaagctcgctgaccggacggatc
attcaaaatgagtgctcagaactgtttgtgcatggccggatttgtgagcattctttgagc
tctgatcaatttgagctacccgttggcattaataagcagcgtgacggctcaactgaggtt
aaaataggcggccaaacagggcaaaaattggcgcaattagcgcagattttgccactgcaa
ttgattcatccggaaggctttgaactgctgaccgatggaccgaaacagcgtcgggctttt
atcgattggggcgtgtttcatactgagcccgcttttttcgatgcatgggggcggtttaag
cggctcagcaagcagcgtaatgcactgctaaaaagcgcgcaaagctatcgtgaactcagt
tattgggatcaagaattagcccgtttggctgagcagattgaccagtggcgtgaaagttac
gtcaatcaattgaaaaatgtggcagagcagttatgtcgcacatttttgccagaattcgat
atcgacttaaagtattatcgaggttgggaaaaagatcagccttatcaatcgattctggaa
aaaaacttcgaacgggatcagcagttgggctatacctttagcgggcctaacaaagcggat
ttgcggattaaagtgaacgcaaccccggtggaagatgtgttgtcgcggggacaactgaag
ttgatggtgtgtgcgttgcgcgtggcgcaagggcagcacctgaccgagttgacgggaaag
caatgcatttatcttatcgatgattttgcttccgaattggatagcctacgtcgccaacgt
ttggcagatagcctaaaagggacgggggcgcaggtttttgtaagttctattaccgaaagc
caagtggcggacatgttagatgagtccagtaaaacatttcacgttgcccacggtgtaata
gagcaaggataa
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