Vibrio cholerae O1 O395: VC395_0222
Help
Entry
VC395_0222 CDS
T02099
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr03420
Nucleotide excision repair
vcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VC395_0222 (uvrD)
03430 Mismatch repair
VC395_0222 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcr03400
]
VC395_0222 (uvrD)
Enzymes [BR:
vcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VC395_0222 (uvrD)
DNA repair and recombination proteins [BR:
vcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VC395_0222 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
VC395_0222 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
ACP08247
UniProt:
A0A0H3ALM1
LinkDB
All DBs
Position
I:227964..230135
Genome browser
AA seq
723 aa
AA seq
DB search
MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMA
VTFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQ
QRLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHINAFDPVTQTYLKLYTAYQEA
CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ
SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN
SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS
RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD
KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL
TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAAL
EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS
QTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL
EKV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccctctctattgctcgacggtctcaacgataaacaacgcgaagcggtggca
gcgccactggaaaacttactgattttggccggtgctggcagtggtaaaacccgcgtactg
gtgcaccggattgcgtggctgatgtcggtggaagaagcctcaccgttttcggtgatggcg
gtgacctttaccaacaaagctgcagccgaaatgcgtggccgaattgaagagctgatgcat
ggcaccgcctctggcatgtggtgtggtactttccacggtatttgccatcgtattctgcgc
gcccattatctcgacgctaagctgctggaagattttcagatcatcgacagtgacgatcag
cagcgtctgctcaaacgcctcatcaaagcgcacaatctggatgataaacagtggccggca
cgccaagtcgcgtggtggatcaacaatcaaaaagatgaaggattgcgcccgacgcacatc
aacgcctttgatccggttactcaaacttatctcaagctgtacaccgcttaccaagaagcg
tgcgatcgcgccggcttggtcgatttcgccgaaattttgctgcgcgccctagagcttctg
cgtggtaatcagcacattcgcgagcattatcaggcgcgctttaagcacattttggtcgat
gaattccaagacaccaacgcgattcagtacgcgtggctacgtatgatggcgggtgctcag
tcgaacgtgatgatcgtgggtgacgatgaccagtcgatttacggctggcgtggcgcgcga
gtggaaaacatcgaaaaatttacccgcgaattcccgagcgtgaataccattcgactggag
caaaactaccgctccaccaaaaccattttggaagcctcaaatacactgatcgccaataat
agcgagcggatgggcaagcagctatggactgacggtttggtcggcgaacccatttcggtg
tactcggcgtataacgagctcgatgaagcacgctttgtggtcagcaaaatcaaaggctgg
caggagcagggcggcacactgaccgattgcgcgatcttgtatcgcaacaacgcccagtcg
cgggtattggaagaggcattattgcaagcgagtttggcctaccgcatttatggcgggatg
cgctttttcgagcgccaagagatcaaagatgcgctgagttatctgcgtttgattaataac
cgcaatgacgacaccgcctttgagcgagtgattaatacgccgccgcgcggtttgggtgat
aaaaccctagagaccattcgctttgccgcgcgcgatcgtggctgcaccttgtgggatgcc
agtgtcggtctgctcaatgaccaagtgctcactgggcgtgctgcgagcgcgctgagccgc
tttgttgaactgatcaacgccttggaagaggaaggcatcgacatgccgctgcatgtgctc
acggaccacgcggtaaaaacctctggtctgctggagatgtatcagcaagaaaaaggcgaa
aaatccaaagcacggattgaaaacttggaagagctggtgacggcgacgcgccagtttgaa
aagccagaagaagcgcaagagatgaccatgctgaccgcatttttgacccatgcggcactg
gaagccggtgaaggtcaagccgatgagcatgatgatgcggtacaactgatgaccttgcac
agtgccaaaggattagagtttccgctggtgtttatggtcggtgtggaagagggtatgttc
ccgagccaaatgtctgccgaagaggcggggcgtctcgaagaggagcgtcgcctgtgttac
gtcggtatgacccgcgcgatgcaaaagctctacatcacctacgcggaaatgcgccgtttg
tacgggcaagataagtatcacaaaccctcacgctttattcgtgaactgccagaaggctgt
ttggatgaagtgcgcatgaaggcgcaagtcagccgtccaaccagtacagggcgctttagc
caaaccgtagtcaaagaaagctttaacgaaaccggttttaatttgggctcacgagtccgt
cacccgaaatttggtgaaggcaccatcattaactttgaaggcagtggcccgcaaagccga
gtgcaagtggcgtttaatggcgaaggtattaagtggttagtcacggcttacgcgagatta
gagaaggtgtag
DBGET
integrated database retrieval system
