Vibrio cholerae O1 O395: VC395_0343
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Entry
VC395_0343 CDS
T02099
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr03030
DNA replication
vcr03430
Mismatch repair
vcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VC395_0343
03430 Mismatch repair
VC395_0343
03440 Homologous recombination
VC395_0343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcr03032
]
VC395_0343
03400 DNA repair and recombination proteins [BR:
vcr03400
]
VC395_0343
Enzymes [BR:
vcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VC395_0343
DNA replication proteins [BR:
vcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VC395_0343
DNA repair and recombination proteins [BR:
vcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VC395_0343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACP08368
LinkDB
All DBs
Position
I:complement(356701..357372)
Genome browser
AA seq
223 aa
AA seq
DB search
MARLSLSNSRLRWLMNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCETTSLDPKRAE
LVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRIRHQDLHDGLSEKEALLQLIE
FIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVSQIYHDKLEKHLPNAYFDLSLE
AICRHLDLPLQDKHDALQDAIAAALVFVRLTKGDLPQFIAPGV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtggctcggttatcactatcaaattcgcgattgaggtggctgatgaactggttattacgc
cgttattggcacgcgaaactcaaaggttctccctatcaacggctgtttgaaaccgcgcgc
catcacgagtacgtctcgctcgactgtgaaaccaccagcttagatcctaaacgcgctgag
ttagtgaccatcgccgcaaccaagatcgttgataaccgcattatcaccagtcaacccttt
gaggtgcgcctgtgcgcgccacaatcgctcgactcgggttcagtgcggattcaccgtatc
cgccaccaagatctgcacgatggtctgagcgaaaaagaggcgcttctccaactgattgag
tttattggcaatcgtcccttggtcggctaccacattcgttacgataagacgattttggat
atcgcctgtcgtaaacatctcgggtttccactccccaaccgactgattgaggtgagccag
atctatcacgataaactggaaaaacacctgcccaatgcctatttcgatctcagtttagag
gcgatctgccgccatctggatctgccactgcaagacaaacatgatgcgctgcaagatgcg
attgccgccgctttggtgtttgtgcgtttaaccaaaggcgatctgccacaatttattgca
ccgggtgtgtaa
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