KEGG   Vibrio cholerae O1 O395: VC395_0390
Entry
VC395_0390        CDS       T02099                                 
Name
(GenBank) putative host factor I protein
  KO
K03666  host factor-I protein
Organism
vcr  Vibrio cholerae O1 O395
Pathway
vcr02024  Quorum sensing
vcr03018  RNA degradation
vcr05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VC395_0390
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC395_0390
   05111 Biofilm formation - Vibrio cholerae
    VC395_0390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcr03019]
    VC395_0390
   03036 Chromosome and associated proteins [BR:vcr03036]
    VC395_0390
Messenger RNA biogenesis [BR:vcr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VC395_0390
Chromosome and associated proteins [BR:vcr03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    VC395_0390
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ACP08413
UniProt: A5F3L7
LinkDB
Position
I:419583..419846
AA seq 87 aa
MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS
TVVPARPVSHHSGDRPASDRPAEKSEE
NT seq 264 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctctacaagacccatttctgaatgcactacgtcgtgaacgtatc
cctgtttctatctaccttgtgaacggcattaaactgcaaggtcagatcgaatcatttgat
caatttgtgatcttgctgaagaacacagtaaaccaaatggtttacaagcatgcgatttct
actgtggttcctgctcgtccagttagccaccacagcggcgaccgcccagcatcggatcgt
ccagcagagaagtctgaagagtaa

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