Vibrio cholerae O1 O395: VC395_0662
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Entry
VC395_0662 CDS
T02099
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcr
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcr03016
]
VC395_0662 (truB)
Enzymes [BR:
vcr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VC395_0662 (truB)
Transfer RNA biogenesis [BR:
vcr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VC395_0662 (truB)
Prokaryotic type
VC395_0662 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ACP08680
UniProt:
A5F928
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All DBs
Position
I:710738..711676
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AA seq
312 aa
AA seq
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MVRRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQ
VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLL
LPMDTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNG
KVAPKRLVVYGE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtcgacgtaaaggtcgggttatccacggtgtgattctgttggataagccgaca
ggtatctcttccaacgacgctttgcaaaaggttaaacgcctctatggcgctgaaaaagcg
ggacatactggcgcgcttgatcctctggcgacgggcatgttgccaatctgcctcggtgaa
gccactaagttttcccaatttctgctcgattctgataaacgttatcgtgtgatcgccaaa
ttgggtgaacgtaccgacacctcagattctgatggtcaagtggtacaaacgcgtcctgtt
cacgtggattacgatacgctgctggcctgtatcgccaagtttcgcggtgaaacggatcaa
gttccatccatgttttcagcgttgaaataccaaggtcgtccactctacgaatacgcccgt
cagggtattgaagtgccgcgtgaagcgcgcaagatcactgtgtatgagattgagctgcat
cgctttgaaggtgatgaagtggagatggaagtacactgctcgaaaggcacttatattcgt
accatagtcgatgatctgggtgaaatgctgggctgtggagcgcatgtgaccatgctgcgc
cgtgtgggtgtcgctaactatccgtatgagcgaatggtgacgctagagcaactcaacgct
ttggttgaacaagcccatcgtgacgaaaaagcggtggcggacgttctcgatccgctatta
ctgccgatggatactgccgtggaagctttacccgaagtcaacgtgatcccagaactgatg
acacttattcagcatgggcaagcagtacaggtttcgggggcaccatccgacggtatggtg
cgcattactggcggcgagcagaagctattccttggcgttggcgagattgacgataacggt
aaggtcgcgccgaaacgcttggtggtgtacggcgaataa
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