Vibrio cholerae O1 O395: VC395_0968
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Entry
VC395_0968 CDS
T02099
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr03030
DNA replication
vcr03430
Mismatch repair
vcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VC395_0968 (holA)
03430 Mismatch repair
VC395_0968 (holA)
03440 Homologous recombination
VC395_0968 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcr03032
]
VC395_0968 (holA)
03400 DNA repair and recombination proteins [BR:
vcr03400
]
VC395_0968 (holA)
Enzymes [BR:
vcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VC395_0968 (holA)
DNA replication proteins [BR:
vcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VC395_0968 (holA)
DNA repair and recombination proteins [BR:
vcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VC395_0968 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ACP08980
UniProt:
A0A0H3AI42
LinkDB
All DBs
Position
I:complement(1039127..1040155)
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AA seq
342 aa
AA seq
DB search
MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW
NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ
ENAAWLKTLAQQACWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLFAL
AQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLEES
EPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQRLPSRALLR
LVGILTQAELLAKTQYEQPVWPILQQLSLECCNPQANLPLPH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttacgctgaaaaactggctgaatcactgcacaaaacgctctatccgatttac
ctcgtattcggtaatgagccactgctgctccaagaagccaaaaccgccatcgaaaaaacg
gcacaagcgcaaggttttttggaaaaacaccgatttagcgcggatgccgggctcgattgg
aacgcggtgtatgactgttgccaagctctgagtctgttttcatctcgccaacttatcgaa
attgagatcccagaatctggggtcaatgctcaaacggcaaaggaacttagcgcactggta
ggccaacttcaccaagacattctcttgctggtgattggccccaaactgactaaggcgcaa
gagaacgcagcttggctcaaaacgcttgcgcagcaagcctgttgggttaactgcctcacg
ccagaattgagccgtttacctcagtttgttcagcagcgctgttttgccctcggtttaaaa
ccggatgccgaagcggtacaaatgttggcgcagtggcatgaaggtaatctctttgcatta
gcccagagtctcgaaaaattagcgttactctaccccgatggtctactgactttagtgcgc
ttggaagagtcgctgagccgccataaccatttcacgccttatcactggatggatgcgcta
ttagaaggcaaagccaaccgagctcagcgtattttgcgccagcttatgctcgaagagagt
gagccgattattctgatccgcaccgcgcaaaaagagctcactcaactgcttaaatggcaa
caagagcgccaacagctgggtaatttggggagtctttttgatcgctatcgtgtctggcag
aatcgaagaccactctactctgccgctttacagcgcttaccgagtcgcgccctacttcgg
ttggttggaatattaactcaggctgaattactggcaaaaacgcaatacgaacagccagta
tggccaatcttgcagcaactaagccttgaatgctgcaatcctcaggcaaacctacctttg
cctcactaa
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