Vibrio cholerae O1 O395: VC395_1061
Help
Entry
VC395_1061 CDS
T02099
Symbol
yfcX
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr00071
Fatty acid degradation
vcr00280
Valine, leucine and isoleucine degradation
vcr00310
Lysine degradation
vcr00362
Benzoate degradation
vcr00380
Tryptophan metabolism
vcr00410
beta-Alanine metabolism
vcr00640
Propanoate metabolism
vcr00650
Butanoate metabolism
vcr00907
Pinene, camphor and geraniol degradation
vcr00930
Caprolactam degradation
vcr01100
Metabolic pathways
vcr01110
Biosynthesis of secondary metabolites
vcr01120
Microbial metabolism in diverse environments
vcr01200
Carbon metabolism
vcr01212
Fatty acid metabolism
Module
vcr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VC395_1061 (yfcX)
00650 Butanoate metabolism
VC395_1061 (yfcX)
09103 Lipid metabolism
00071 Fatty acid degradation
VC395_1061 (yfcX)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VC395_1061 (yfcX)
00310 Lysine degradation
VC395_1061 (yfcX)
00380 Tryptophan metabolism
VC395_1061 (yfcX)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VC395_1061 (yfcX)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VC395_1061 (yfcX)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VC395_1061 (yfcX)
00930 Caprolactam degradation
VC395_1061 (yfcX)
Enzymes [BR:
vcr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VC395_1061 (yfcX)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VC395_1061 (yfcX)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VC395_1061 (yfcX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
Motif
Other DBs
NCBI-ProteinID:
ACP09073
UniProt:
A5F2P2
LinkDB
All DBs
Position
I:1138298..1140472
Genome browser
AA seq
724 aa
AA seq
DB search
MCCGWLRRCYDSGGGIMDNNNAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFA
TLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFP
VVAAIHGPCLGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLP
ALDLILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLA
NTGLGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMT
RESKALRSIFFATTEMKKDLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKD
VANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFED
LKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEV
IPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKL
DAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSG
KGFYTYKGSKKKEVDKSVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSAR
DGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGE
KFYP
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
ttgtgctgcgggtggcttaggcgctgctatgattctggaggtggaataatggataacaac
aatgcatttcagctctcgtttgatgagcagcattacgcttggctggcgattgatgtcccg
ggcgaaaaaatgaataccctgcaagcggcatttgcagaagagatgcaagccgtttttgca
acgctcaatgaaaaacgaggacagatcaaagggctgattatccactctcttaagccggat
aactttattgcgggtgcggatgtccgcatgttggaagcttgccaatcggtacatgaagca
caagcgttagcctcgcaggggcaacagatgttccagcagcttgccgatttgcctttccct
gtggtcgcggcgattcacggcccttgcttaggcggtggtttagaattggctctggcgtgt
gattatcgtgtctgtactgaagatgaggtaacacgtctaggcttaccagaagtgatgttg
ggtttgcttccgggctctggcggtacgcagcgtttaccacgtttgattggtttactgcct
gcgctggacctcatcttaacgggcaaacaattgcgtgccaaaaaggccaagaaattgggt
gtggttgatgcatgtgttccgcactcagtactgttggatgtggccaaacgtcttctagaa
gaaaaagggcacaaaaagcgcgctcaagttacgctaccgatcaaagaaaaactgctcgcc
aataccggcttggggcgtaagttgatttttgaccaagcggccaagaaaacgcagcagaaa
acgcgtggtaactaccccgcagcgcaagccattttagaggtcattcagtatggcctagaa
aaagggatgcatgctggcttggaatatgaagccaagcgtttcgctgaattggtgatgacc
cgagaatcgaaagcactgcgctccattttctttgcgaccacagagatgaaaaaagatctc
ggtgcggatgccaaacccgcacctgtggcggctgtgggcgtgctcggtggtggtttgatg
ggggctggcatcagtcacgttactgtggcgaaagccaaaacatcggtgcgcatcaaagat
gtggcgaatgatggtgtgctcaatgccctcaattacaactacaagctgtttgataagcag
agacagcgcaagattttgactaaagcacagctgcaagcgcagatgtcgcagctctcgggt
gggactggctttgtgggttttgatcgctgtgatgtagtgatagaggctgtgtttgaagac
ctgaaacttaagcaacaaatggtggcggatattgaagcgaatgccaaaccgacaacgatt
tttgcgaccaacacatcctcgctgccgatccatcagatcgcgagccaagcgcagcgtccg
caaaatattgtgggtttacattatttcagcccagttgaaaaaatgccgttggtggaagtg
attcctcacgcgaccacctcggatgaaaccattgcgaccgtggtgacattggcacgtaag
cagggcaaaacaccgattgttgttaaagactgtgctggtttttatgtcaaccgcatttta
gcgccttatatgaatgaagccgcgcaagtgctgatggcgggtgaacctatcgaaaaactc
gatgctgcgttactggattttggtttcccagtggggcctatcaccttgcttgatgaagta
ggggtcgatatcggagccaagatcatgccgattttggttaaagagcttgggccgcgtttc
caaggaccggacgtctttgatgtgcttttgaaagataaccgtaaaggccggaaaagcggt
aaaggtttctacacctacaaaggcagcaagaagaaagaagtcgataaatccgtttataaa
ctgctgaagttaaccccggaatctaagctaaacgacaaagaaatcgcgatgcgttgcttg
ttgcctatgctcaatgaggcggttcgttgtctcgatgaaggcattattcgcagtgcacgt
gatggcgatatgggcgcgatttttggcatcggtttcccgccgttcttaggtgggcctttc
cgttacatggacacgcttggtttaaccaaagtggtggaaatgatgaaccaacacaccgag
aaatatggagagcggtttgctccatgtgacggtttgttgacgagagcgggattgggcgag
aagttctacccctag
DBGET
integrated database retrieval system
