KEGG   Vibrio cholerae O1 O395: VC395_2034
Entry
VC395_2034        CDS       T02099                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
vcr  Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:vcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcr03032]
    VC395_2034 (hupB)
   03036 Chromosome and associated proteins [BR:vcr03036]
    VC395_2034 (hupB)
   03400 DNA repair and recombination proteins [BR:vcr03400]
    VC395_2034 (hupB)
DNA replication proteins [BR:vcr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    VC395_2034 (hupB)
Chromosome and associated proteins [BR:vcr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    VC395_2034 (hupB)
DNA repair and recombination proteins [BR:vcr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      VC395_2034 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 ACP_syn_III_C Arteri_nsp7a GTP_EFTU_D2 VWA_2 HU-CCDC81_euk_1 Nup214_FG
Other DBs
NCBI-ProteinID: ACP10027
UniProt: A0A0H3AHN6
LinkDB
Position
I:complement(2153432..2153704)
AA seq 90 aa
MNKTQLVEQIAANADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIKIAEAKVPSFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataagacacaactagtagaacaaattgcagcgaacgcagatatctctaaagcctct
gcaggtcgcgctcttgacgcattcatcgaagcagtcagcggcacactacaatcaggtgac
caagtggcactggttggttttggtacgttcagcgtacgtactcgcgcagcgcgtactggt
cgtaacccaaaaactggcgaagagatcaaaatcgctgaagcgaaagtgccttcattcaaa
gcaggtaaagctctgaaagacgcttgcaactaa

DBGET integrated database retrieval system