Vibrio cholerae O1 O395: VC395_2034
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Entry
VC395_2034 CDS
T02099
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
vcr
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcr03032
]
VC395_2034 (hupB)
03036 Chromosome and associated proteins [BR:
vcr03036
]
VC395_2034 (hupB)
03400 DNA repair and recombination proteins [BR:
vcr03400
]
VC395_2034 (hupB)
DNA replication proteins [BR:
vcr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VC395_2034 (hupB)
Chromosome and associated proteins [BR:
vcr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VC395_2034 (hupB)
DNA repair and recombination proteins [BR:
vcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VC395_2034 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Arteri_nsp7a
GTP_EFTU_D2
VWA_2
HU-CCDC81_euk_1
Nup214_FG
Motif
Other DBs
NCBI-ProteinID:
ACP10027
UniProt:
A0A0H3AHN6
LinkDB
All DBs
Position
I:complement(2153432..2153704)
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AA seq
90 aa
AA seq
DB search
MNKTQLVEQIAANADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIKIAEAKVPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagacacaactagtagaacaaattgcagcgaacgcagatatctctaaagcctct
gcaggtcgcgctcttgacgcattcatcgaagcagtcagcggcacactacaatcaggtgac
caagtggcactggttggttttggtacgttcagcgtacgtactcgcgcagcgcgtactggt
cgtaacccaaaaactggcgaagagatcaaaatcgctgaagcgaaagtgccttcattcaaa
gcaggtaaagctctgaaagacgcttgcaactaa
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