Vibrio cholerae O1 O395: VC395_2289
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Entry
VC395_2289 CDS
T02099
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr00541
Biosynthesis of various nucleotide sugars
vcr01100
Metabolic pathways
vcr01250
Biosynthesis of nucleotide sugars
Module
vcr_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VC395_2289 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcr01005
]
VC395_2289 (kdsA)
Enzymes [BR:
vcr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
VC395_2289 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vcr01005
]
Lipid A
VC395_2289 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ACP10281
UniProt:
A5F692
Structure
PDB
PDBj
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Position
I:complement(2405204..2406055)
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AA seq
283 aa
AA seq
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MEHKIVHVGDIPVANDKPFTLFAGMNVLESRDLAMQICEHYVKVTDKLGIPYVFKASFDK
ANRSSVHSYRGPGLEEGMKIFQELKETFGVKIITDVHTEAQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFMSPGQVGNIVEKFAECGNDKVILCERGSCHGYDNLVVD
MLGFGVMKQASNGSPIIFDVTHSLQMRDPSGAASGGRREQTVELAKAGLATGIAGLFIEA
HPNPDKARCDGPSALPLDKLEPFLAQMKALDDLIKSFAHIDIR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaaaattgtccatgtcggtgatattccggttgccaacgataagccgtttacc
ctatttgcagggatgaacgtactggaatcgcgtgatttggcgatgcaaatttgtgagcac
tacgtgaaagtgaccgacaagctcggcatcccttatgtgttcaaagcatcgtttgataaa
gcgaaccgcagttcagtgcactcttaccgtggcccaggcttggaagaagggatgaaaatt
ttccaagagctgaaagagacctttggcgtgaagatcatcaccgatgtccacacagaagcg
caagcgcagcctgtggcggatgtggtggatgtgattcagctacctgcctttttggcccgt
caaaccgacttggttgaagcgatggcgaaaaccggcgcggtcattaacgtgaaaaaaccg
cagttcatgagcccgggtcaagttggcaacatcgttgagaagtttgctgagtgtggcaat
gacaaagtgatcttatgtgaacgtggctcttgccacggctacgataacctcgtcgtcgat
atgctcggctttggtgtgatgaagcaagcttctaacggcagtccaatcatttttgatgtg
actcactcactgcaaatgcgtgatccatcaggtgcggcatcgggcggtcgtcgtgagcag
accgttgaactggcgaaagccggtttggcgacgggcattgcaggtctgtttattgaggcg
cacccaaatccagataaagcgcgttgcgatggcccatcggcattacctctcgacaaatta
gagccattccttgcgcaaatgaaagcgctggatgatttaatcaaaagctttgcgcacatc
gatattcgataa
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