Vibrio cholerae O1 O395: VC395_2436
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Entry
VC395_2436 CDS
T02099
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, 135 kDa subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VC395_2436 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcr03400
]
VC395_2436 (recB)
Enzymes [BR:
vcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VC395_2436 (recB)
DNA repair and recombination proteins [BR:
vcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VC395_2436 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
SLFN-g3_helicase
AAA_11
WHD_ORC2
AAA_25
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACP10426
UniProt:
A0A0H3AK45
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All DBs
Position
I:complement(2553397..2557023)
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AA seq
1208 aa
AA seq
DB search
MSADSNKLAVTLDTLRFPLHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLS
VDQILVVTFTEAATAELRDRIRRRLHDARLAFARGASDDPLLRSLLAEFTDHNLAVSLLL
SAERQMDEAAIFTIHGFCQRMLTQNAFESGSRFENEFVTDESSLKAQVVADYWRRQFYPL
PIALASEVRRLWPAPSALLAEIAGYLSGPPVKLTTPLMEGDLAALQQAQIARISEIKQHW
LAEREEIEPAVTGSDLHKNSQNALLRRLPILDAWAQSETHDLHVPSELEEFTQSGLLAKS
KKGNPPQLALFERIEAFLAEPVSLKTPLLVHAIHHCRHWLAKAKSTHHWLSFDDLLTQLS
AALDNDEQGLLGERIRSLYPVAMIDEFQDTDPLQYSIFSRLYLDHPQCGLLMIGDPKQAI
YAFRGADIFTYIKARNQVSAHYTLGTNWRSSAAMVAAVNQVFSSATHPFIYSDDIPFQPV
AASPGTDKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACAAQIQHILTASASG
AAAFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDSVFASDVAQDIERL
LLAVWQPEDERLLRAAIASNLFALTASELDALNNDENEWEQLIAEFRQYRRLWSERGVLP
MLRAVLTQRHIAERWLTESEGERWLTDYLHISELLQQATREIDSDQGLLRFLTQAMADAA
QGLGGSDEQIQRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDTESATT
WVDLTGNEEALAKADQERLAEDLRLLYVALTRAVYGCFIGIAPLRNGNSSQEPTSAHRSA
MGFLLQDGQEGGIADLQQALLKQCENLPDVVQCPPPKRFEQAYQPPQLDERELTARELSQ
AIDRRWRVTSYSGLVMQSSHARHDPLQELPLLEVGGFDLDSAQERDGAALESVERSIFNF
PRGARPGTFLHSLFEEVDFQQSAHSEPNTKIILDLMESEQIESEWLPVLQHLVDTVLSTP
LDGKALRLQQIMAAQRLTELEFLLPIEVLDAPTLNRITQRHDPLSAQAGDLGFHAVQGML
KGFIDLVFQYQGRYYVLDWKSNHLGDDPAAYHPQRLSGAMADHRYDLQYQIYALALHRFL
RSRLAHYNYEQHFGGVFYLFLRGMDGRTDQGVFHTKPSLALLDELDGLIAGRELAQRASK
AGQMELDL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgattcaaataagctcgctgttacgctcgatacgttgcgttttcctttgcat
ggagcgcggctgattgaggcctcggcaggcaccggaaaaacctacaccattgccggactc
tatctgcgtctggtgcttggacatggctgcgcggaaactcgtcacgcgcatccactgagt
gtggatcaaattctggtggtgacttttaccgaagcggccactgcagagctgcgtgaccgt
attcgtcgccgcttgcacgatgcgcgcctcgcttttgctcgtggcgcgagtgacgatccg
ctgcttcgctccctgctggctgaatttaccgatcacaacttagccgtctctttgttgctg
agtgccgagcggcagatggatgaagcagcgattttcaccatccacggtttttgccaacgg
atgctgacgcaaaatgcgtttgaatcgggcagtcgctttgaaaatgaattcgtcactgat
gaaagtagtctcaaagctcaagtggtggccgattattggcgcagacagttctaccctttg
cccattgccctcgcgagcgaagtgcgccgcttatggcctgcaccctctgcactgttggct
gagattgccggttatctttctgggccgccagtcaaactgaccacacctttgatggaaggg
gatttggccgcgctgcaacaagcgcagatagcgcgcattagcgagattaagcagcactgg
ttagcggagcgagaggagattgagcccgcagtaactggctctgacctgcacaaaaatagc
caaaatgcgctgctgcgccgtttgccgattctggatgcttgggcgcaaagtgaaacgcac
gatctgcacgtgccgtcagagcttgaagagttcacccaaagcgggttgcttgccaaatca
aagaaaggcaatccgccacaattagcgctgtttgaacgaatagaagcatttcttgctgag
cctgtgtcactcaaaacaccgcttttggtgcatgcgattcatcactgtcgtcactggttg
gcgaaagccaaatccacccatcattggctctcgtttgatgacttactgactcaactcagc
gctgcgctcgataatgatgagcaagggctattgggcgagcggatccgctcgctttatccg
gtggcgatgatcgacgaattccaagataccgacccgctgcagtacagcattttcagtcgg
ctgtatctggaccatccgcagtgtggcttgttgatgatcggcgacccgaaacaggcgatt
tacgccttccgtggcgccgatattttcacttacatcaaagcgcgtaatcaggtgagcgct
cactacaccttgggtacgaactggcgctccagcgcggctatggtggcggccgtgaatcaa
gtgtttagctccgcgactcatccgtttatttacagtgatgacattccctttcagcccgtg
gcggcaagccctggtactgataaacgccattggtcactggaggggcaagtacaaccagcc
ttgacctattggtggccggaagatctcgataagccgcaaagcaagaccgattactacgcg
caaatggctgaggcgtgtgcggcgcaaatccagcacattttgactgcttcggcctctggc
gcggcggcctttcaccgtggcgaggcgattgaagcgggcgatctggcggtgctagtgcgt
accggtaatgaagcgcgtatggtgcgtgatgcgctcagtcagcaaggcatcgccagtgtt
tacctttccaaccgtgacagcgtgtttgccagtgatgtggcgcaagatattgaacgcttg
ctgctcgccgtgtggcagccagaagatgaacgcttgctccgtgcggccatcgcctcgaat
ctgtttgcgttaaccgccagcgagctggatgcgctgaataacgatgaaaacgaatgggaa
cagttaattgccgaatttcgtcaatatcgccgcttgtggagcgagcgcggcgtattgccg
atgctgcgggcggtattaactcagcgccacatcgccgagcgttggctgacggaaagtgaa
ggtgagcgctggctcaccgattatctgcacatcagcgaactcttgcagcaagcgacgcgt
gagatcgatagcgatcagggcttactgcgttttctgactcaggcgatggcggatgctgcc
caaggattggggggcagtgatgagcagatccagcgtctcgaatctgagcggcgtctggtg
cagattgtcaccatccacaaatcaaaagggcttgagtacccgctggtgtttttgccgttt
gtgatgagctatcgcgagagcagtgaaggcaaatattacgatactgaatcggccactact
tgggtcgatttaaccggcaatgaagaggcgttagccaaagccgatcaagaacgtttggca
gaagatttacgcttgctgtatgtggcgctcactcgcgcagtgtatggctgttttattggg
attgcgccgctgcgcaacggcaattcgagccaagagccgacctcggcgcatcgcagtgcg
atggggtttctgctgcaagatggtcaagaaggtggtatcgcggatctgcagcaagcgctg
cttaaacagtgtgaaaacttgccagatgtcgtgcaatgcccgccaccgaagcgtttcgaa
caagcgtatcagccaccccaattggacgagcgagagctgactgcccgtgagttaagccaa
gcgattgatcgccgttggcgagtgaccagttactcaggcttggtgatgcaatcaagtcat
gctcgccatgatcctttgcaagagttgcccttgcttgaagtaggcggttttgatcttgat
agtgcgcaagagcgtgatggagcggcgctggaatctgtcgagcgttcgattttcaatttc
ccgcgtggcgcacgccccggcactttcttgcattcgctgtttgaagaggtggatttccag
caatcggcacacagtgaacccaatactaaaatcatccttgatttgatggaaagtgagcag
attgaaagcgagtggctgccggtgttgcaacacttggttgacaccgtattgagcacgcca
ctggatggtaaagcgctgcgcttacaacaaattatggccgcccagcgtctgaccgagttg
gagtttttattgccgatcgaagtgttggatgcgccaaccctgaatcgcatcacccagcgt
cacgatccgctttcggcacaggcgggcgatctcggttttcatgcggtgcaaggcatgctc
aaaggctttatcgatctggtgtttcaatatcaagggcgctattacgtgctggactggaaa
tccaaccatttaggtgacgatcctgcggcgtatcatccacagcgtttgagcggtgcgatg
gccgatcaccgttacgatctgcaataccagatttacgcgttagcgctgcatcgctttttg
cgcagccgtttagcccattacaattacgagcagcatttcggcggcgtgttttatctcttc
ttacgcgggatggatggccgcaccgatcaaggcgtgttccataccaagccaagcttggcc
ttgttagatgagttggatggattgattgcagggcgcgagctggcacaaagagcgagtaaa
gctgggcagatggagcttgatttatga
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integrated database retrieval system
