Vibrio cholerae O1 O395: VC395_2532
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Entry
VC395_2532 CDS
T02099
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr03410
Base excision repair
vcr03430
Mismatch repair
vcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VC395_2532 (recJ)
03430 Mismatch repair
VC395_2532 (recJ)
03440 Homologous recombination
VC395_2532 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcr03400
]
VC395_2532 (recJ)
DNA repair and recombination proteins [BR:
vcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
VC395_2532 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VC395_2532 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VC395_2532 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ACP10519
UniProt:
A0A0H3AK57
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All DBs
Position
I:complement(2675466..2677220)
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AA seq
584 aa
AA seq
DB search
MACHSMIEIQRRPEPDLSLLPDHIDPLLRRLYLSRGVSNVAQLEKAAKALHSFKQLHGID
RAVELLFAAIAEQKRIIVVGDFDADGATSSALSVLALRMLGSRNVDYLVPNRFEDGYGLS
PEVVDQAIERGAEMIMTVDNGVSSLEGVRYAKQKGLQVVVTDHHLPGQELPEVDAMVNPN
LQQCAFPSKALAGVGVAFYLMMALCVHMRQQGWFAAQGMVEPKLMELIDLVALGTVADVV
PLDDNNRILVHQGLQRIRAGLARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLD
DMSFGVELLLCNNIHAARRMASELDGLNQTRKEIEEGMKQEAVAFCERLQLSDDRELPYG
LVLFQRDWHQGVIGILASRIKEKYHRPVIAFAEGGDGKLKGSCRSVPGLHMRDALDKIDT
QNPGIILKFGGHAMAAGLTIEEQNFEHFCRLFDQLVREELDEAALQGIILSDGELKPEEF
SLHTAELLRAGGPWGQAFPEPLFDGEFKVLHQKLVGEKHLKLMLEPLYKGFPTNVMIDGI
AFNVDLRRWPDVSVKTVRLAYKLDINEFRGNQSLQLMIDYLEAK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
ttggcctgtcacagcatgatagaaatccagcgacgccccgaacctgatctctcacttctc
cccgaccacatcgacccactgttacgtcggctttacctgagccgtggtgtaagcaacgtg
gcacaacttgaaaaagccgccaaagcgctgcactcattcaagcagttacatggtattgat
cgtgcggttgagttgctgttcgcagcgattgctgagcaaaaacgcatcatagtcgtcggt
gattttgatgccgatggcgcaaccagttcggcactttccgtgctcgcgctgcgtatgctc
ggtagtcgtaatgtcgattacttagtgccaaaccgttttgaagatggttatggtctgagc
cctgaagtggttgatcaagcgattgagcgtggcgcagagatgatcatgaccgtggataac
ggcgtttcatcactggaaggggtgcgttacgccaaacagaaagggctgcaagtggtggtc
accgatcatcacttaccgggacaagaactccctgaagtcgatgccatggtaaacccgaac
ttgcagcagtgtgcttttccttctaaggcgctggctggggtgggggttgctttctatttg
atgatggcactttgtgtgcacatgcgtcagcaaggttggtttgccgcgcaaggcatggtt
gaaccgaaattgatggaactgatcgatttagtggcactcggtacggtcgccgatgtggtg
ccactggatgacaacaatcgtattttggtgcaccaaggtttgcagcgtattcgtgcgggt
ttagcgcgccccggtattcaagctctgattgaagtcgccaaacgggatgcgcgccgtttg
gtcgctgctgattttggctttgcgcttggaccacggattaacgccgcagggcgtttggat
gatatgtcgttcggcgttgaacttttgctgtgtaacaacattcacgctgcgcggcgtatg
gcgagtgagctggacggcctcaatcaaacccgaaaagagattgaagaggggatgaagcaa
gaggcggtcgcgttttgtgagcgtttgcaactgagcgatgatcgcgagctgccttacggt
ttagtgctgtttcagcgcgattggcaccaaggggtgatcggcattcttgcttcgcgcatc
aaagagaaataccaccgacccgtgattgcgtttgctgaaggtggtgatggcaagctaaaa
ggttcatgtcgctcggttcccggtctgcatatgcgtgatgcactagataaaattgatacg
caaaacccgggcatcatactcaaatttggtggtcacgcgatggcggctggattaaccatt
gaagagcaaaattttgaacatttttgccgattgtttgaccagctagtgcgtgaagagctg
gatgaagcagcactccaaggcatcatcctcagcgatggcgaactgaaaccggaagagttt
tcgctgcataccgccgaattactgcgtgccggtggcccgtgggggcaagcgtttcctgaa
cccctatttgatggtgaatttaaagtgctgcaccaaaaactggttggcgaaaaacacctc
aaactgatgcttgagccgctgtataaaggctttccaaccaatgtgatgatcgacgggatt
gcgtttaatgtcgacctacgccgctggccggatgtctcagtcaaaacggtacgtttggcg
tacaaactcgacatcaacgagtttcgcggtaatcaatcattgcaactcatgattgattat
ctggaagcgaaatga
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