Vibrio cholerae O1 O395: VC395_2620
Help
Entry
VC395_2620 CDS
T02099
Symbol
hepA
Name
(GenBank) RNA polymerase-associated protein HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vcr
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcr03021
]
VC395_2620 (hepA)
Transcription machinery [BR:
vcr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VC395_2620 (hepA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
NAT10_TcmA_helicase
AtoS_N
WWE
AAA_22
STB2_C
Motif
Other DBs
NCBI-ProteinID:
ACP10606
UniProt:
A5F5C5
LinkDB
All DBs
Position
I:complement(2778076..2780985)
Genome browser
AA seq
969 aa
AA seq
DB search
MSFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYARSDAPVTRVIFNVGDV
VDSQQGWSLQVEQVVEDQGVYTYLGTRVDTEESGVALREIFLSNQIRFNKPQDKLFAGQI
DRMDNFVLRYRALANQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLTGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAFS
EADNPFETQQYVLCSLDFLRKSRQRFEQALEAEWDLLVVDEAHHLEWHPEKPSREYQVIE
ALAEQTPGVLLLTATPEQLGRESHFARLRLLDADRFYDYEAFVKEEEQYAPVADAVTALF
SGEKLSDEAKNKITELLSEQDVEPLFKALESHASEDEIALARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPVRNVHLLPLEIPSQYTTSMRVAGMLGGKLTPEARAMKMLYPEEIFQEFE
GDESSWWQFDSRVNWLLEKVKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGM
SIIERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQKRDIDVYVPYLTETSQAILARWFQEGLNAFAETCPTGRAVYDAFAERLIPILAAGG
GEELEVIIEESAKLNKTLKSQLEVGRDRLLEMHSNGGEKAQQIAEQIAKTDGDTNLVTFA
LSLFDAIGLHQEDRGENALVVTPAEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMVQGGIDLLMSEGVGTCAVSLLKNKALPVGTILLELVYVVDAQAPKRSGISRFLPVS
PIRILMDARGNDLSSQVEFESFNRQLSPVNRHLASKLVSSVQHDVHRLITASEAAVEPRV
SAIREQAQRDMQQSLNSELERLLALKAVNPNIRDEEIEVLEQQIKELTGYIAQAQYQLDS
LRLIVVAHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgctttagggcaacgctggataagcgatacggaaagtgatctcgggttaggt
actgtggtggcgcttgatgcgcgtacagtgaccttgatgtttgcagcatcggaagaaaat
cgtgtgtatgcacgttcagatgcgccggtcacccgtgtgatctttaatgtcggcgatgtg
gtggatagtcagcaaggctggtcgttacaagttgaacaagtggtggaagaccaaggcgtc
tacacctatctaggcacccgagtggataccgaagaaagcggtgtcgcgctgcgtgaaatt
ttcctcagtaaccaaattcgttttaataaaccgcaggacaagttgtttgccggtcaaatc
gatcgcatggacaacttcgtgctgcgttatcgcgctctagccaatcaatatcaacagcac
aaaagcccaatgcgtggcttgtgtggtatgcgcgctgggctgatcccgcatcagttgtac
attgcccatgaagtcggtcgccgccatgcgccacgcgtattgttagccgatgaagtcggt
ttgggtaaaaccatcgaagcgggcatgatcatccatcagcaagtgctgaccgggcgtgcc
gagcgcatcctgattgtggtgcctgaaacgctgcaacaccaatggttggtggagatgatg
cgccgtttcaacctgcacttttcgatttttgatgaagagcgctgtgtggaagcctttagc
gaggccgataacccatttgaaactcagcagtatgtgctgtgttcactcgatttcttgcgt
aaaagccgccagcgttttgaacaagccttggaagcggaatgggatttattggtcgtcgat
gaagctcaccatcttgagtggcacccagaaaagccaagccgcgaatatcaagtgattgaa
gctctggccgaacagactccgggcgtactgctattgacggcaacgcctgagcagttaggt
cgtgaaagccactttgctcgtctgcgcctgctggatgcagatcgtttctacgattacgaa
gcctttgttaaagaagaagagcaatacgcacccgttgccgatgccgttactgcgctgttc
agcggtgagaagctgagtgatgaagcgaaaaacaaaatcactgagctattgtctgagcaa
gatgtggagccgctgtttaaagcgttggaaagccacgccagcgaggacgaaattgctttg
gcgcgccaagagctgatcgacaatctgatggatcgccacggtactgggcgtgtgttgttc
cgtaacacgcgtgcggcaatcaaaggcttcccagtgcgtaatgtgcatttgctgccattg
gagatcccttctcaatacaccacgtcaatgcgtgttgcgggcatgctcggcggtaaactg
acgccagaagcgcgcgcgatgaaaatgctctacccggaagagattttccaagagtttgaa
ggtgacgaatcaagctggtggcaatttgactcacgcgttaactggttgctcgaaaaagtc
aaagccaaacgcagcgagaagatcctcgtcatcgcttcacgtgccagcaccgcgttgcag
ctagagcaggccttgcgtgaacgtgaaggcattcgcgcaacggtatttcatgaaggcatg
tcgattattgagcgtgacaaagccgctgcttactttgcccaagaagagggcggtgcgcag
gtgttgatctgtagtgaaatcggctccgaaggtcgtaacttccagtttgcgaaccaattg
gtgatgtttgatctgccgttcaacccagacttgctggagcagcgtatcgggcgtttggac
cgtatcggccaaaagcgtgatatcgatgtgtacgtgccgtatttgaccgaaacgtcacaa
gcgattttggcgcgttggtttcaagaaggtttgaatgcctttgcggaaacctgtccaacg
ggtcgtgcggtgtacgatgccttcgctgagcgtttaatcccaattctggccgctggtggc
ggtgaagagctggaagtgatcatcgaagagtcagccaagctcaacaaaacactgaaatcg
cagctggaagtcgggcgtgatcgcttgttggaaatgcattctaacggtggcgaaaaagcg
cagcagattgccgagcagatcgcgaaaaccgatggcgataccaatctggtgacgtttgcc
ttgagcctgtttgatgcgattggtctgcatcaggaagatcgtggcgagaatgctctagtg
gtcactcctgccgaacacatgatggtgccaagctatccgggcctcccttatgaaggcgcc
accattacctttgatcgtgacaccgcactgtcgcgtgaagatatgcacttcatcagttgg
gaacaccccatggtgcaaggtggcattgatttactgatgagtgaaggggtgggcacttgc
gcggtgtcgctgttgaaaaacaaagcactgccagtgggtactatcttgctggagctggtg
tatgtggtggatgcccaagcgccgaaacgcagtggcatcagccgcttcttgcctgtctcg
ccaatccgaattctgatggatgcgcgcggtaatgatctctcttcgcaagtggagtttgaa
agctttaaccgtcagctcagcccagtgaatcgtcatttggccagcaagctggtgagttca
gtacagcatgacgtgcatcgtttgattacggcaagtgaagcggcggttgaaccgcgagtg
agcgcgattcgtgaacaagcgcagcgtgatatgcagcagagccttaacagcgagttggag
cgtttgctggcactcaaagcggttaacccgaacattcgtgatgaagagatcgaagtgctg
gagcagcaaatcaaagagttgactggctatattgcgcaggcgcagtatcagctggattca
ctgcgtttgattgtggtggcacacaactga
DBGET
integrated database retrieval system
