KEGG   Vibrio cholerae O1 O395: VC395_2760
Entry
VC395_2760        CDS       T02099                                 
Symbol
aphA
Name
(GenBank) conserved hypothetical protein
  KO
K10917  PadR family transcriptional regulator, regulatory protein AphA
Organism
vcr  Vibrio cholerae O1 O395
Pathway
vcr02024  Quorum sensing
vcr05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC395_2760 (aphA)
   05111 Biofilm formation - Vibrio cholerae
    VC395_2760 (aphA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vcr03000]
    VC395_2760 (aphA)
Transcription factors [BR:vcr03000]
 Prokaryotic type
  Helix-turn-helix
   PadR family
    VC395_2760 (aphA)
SSDB
Motif
Pfam: Vir_act_alpha_C PadR HTH_34
Other DBs
NCBI-ProteinID: ACP10745
UniProt: A0A0H3ALI5
LinkDB
Position
I:2906798..2907337
AA seq 179 aa
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQ
EGKPDRKVYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVE
ESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAMA
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtcattaccacacgttatccttactgttcttagcacacgcgatgcaaccgggtacgat
ataaccaaagagttttctgctagcattggctacttctggaaagccagccatcagcaggta
tatcgtgaactcaataaaatgggggaacagggtttagtgacttgtgttctggaaccacag
gaaggcaaaccagatcgcaaggtttattctataacccaagctggccgcagcgctttaggt
gagtggtttgatcaaccaaccgcacacccaaccgtgcgtgatgagtttagtgcgaaattg
atggcttgttcagtacaatcggcagaaccttaccgtctgcaactggctgaactggttgaa
gaatcgcgtaaattggtcgctcactatcaggaaatcgaagccgcttattacgctaaccca
gccgtgttagacaagcagcaacgtttagagcgtttaacgctacgtcgtaatttactggtt
cgccaagcatggattcaatgggcggacgaagtgttggcagaattgaacgcgatggcataa

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