Vibrio cholerae O1 O395: VC395_2760
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Entry
VC395_2760 CDS
T02099
Symbol
aphA
Name
(GenBank) conserved hypothetical protein
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vcr
Vibrio cholerae O1 O395
Pathway
vcr02024
Quorum sensing
vcr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VC395_2760 (aphA)
05111 Biofilm formation - Vibrio cholerae
VC395_2760 (aphA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcr03000
]
VC395_2760 (aphA)
Transcription factors [BR:
vcr03000
]
Prokaryotic type
Helix-turn-helix
PadR family
VC395_2760 (aphA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
ACP10745
UniProt:
A0A0H3ALI5
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All DBs
Position
I:2906798..2907337
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQ
EGKPDRKVYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVE
ESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAMA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgttatccttactgttcttagcacacgcgatgcaaccgggtacgat
ataaccaaagagttttctgctagcattggctacttctggaaagccagccatcagcaggta
tatcgtgaactcaataaaatgggggaacagggtttagtgacttgtgttctggaaccacag
gaaggcaaaccagatcgcaaggtttattctataacccaagctggccgcagcgctttaggt
gagtggtttgatcaaccaaccgcacacccaaccgtgcgtgatgagtttagtgcgaaattg
atggcttgttcagtacaatcggcagaaccttaccgtctgcaactggctgaactggttgaa
gaatcgcgtaaattggtcgctcactatcaggaaatcgaagccgcttattacgctaaccca
gccgtgttagacaagcagcaacgtttagagcgtttaacgctacgtcgtaatttactggtt
cgccaagcatggattcaatgggcggacgaagtgttggcagaattgaacgcgatggcataa
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