Vibrio cholerae O1 O395: VC395_A0803
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Entry
VC395_A0803 CDS
T02099
Name
(GenBank) putative exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vcr
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcr03400
]
VC395_A0803
DNA repair and recombination proteins [BR:
vcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VC395_A0803
Archaeal homologous recombinant proteins
VC395_A0803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ACP11636
UniProt:
A0A0H3AEV0
LinkDB
All DBs
Position
II:complement(756624..759665)
Genome browser
AA seq
1013 aa
AA seq
DB search
MRPLKLILQAFGPFVGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE
RTGDQMRCDYADPESLTEVSFEFELAGARYQITRQPDQEIPKKRGEGMTKKSHSATLVAL
KADGNELIANKPNPVAKAVIELMGLDVKQFRQVMVLPQGKFRELLTANSKEREQIFGQLF
QTQLYSQIERALFERAAGIRKEKEEFDQQIKGTLSVVGLESEEQLQTELTELAPVLTHAQ
SQLKAEQQQWDETKAHYQAALELEQQFIRKQQLVVEIATHQEQASHIEMLRQQRQQAQKA
ARLTAVHQQWHQAQKNLLQAKLKVEQQQTLLQQAKAQQQQAQQVSQQASLACEEVPKLNE
QRITWQRAEQKLLAQENVQQAVAKAERELQLATQNALNLQHASEKLEQELQNQRLEWEQQ
QRQLTRLEVQKARMNQLVQQVQAREREQSLLNELQTAQQALLRFEQQHRHIQTQAEQAKL
TADKLEFAWHTQRAAELALALTQNEPCPVCGSLEHPNKAQYSGDVVTKVQVEKARQQQQD
WVQRQQEAFHAWQQQGFKTEQIAQNLTTLSSELTLQQVALLNELIEQQQILHSDIAALQQ
LNPDLLKRQIEEGEQRLAHTKMTLEKQNQNQQQAWQTLAQLQAELASLRQEIPPELSNLD
TLRSAIGRVQNQIEILQKAEHTAREQWVQAQKQFASVQAAHQAAIEAHRESQRQQEETTS
AWQQGLLHSGFNDESAYLAARLTDEAIGNIERQIAQYEERSAMLSGEQQALSRKLAEKNR
PELEPLLVKVTQAEEKMELALQAFTQHQSRMDGLQRVAKQLADLYQKNRALEAEYQVVGT
LSDIANGKTGAKVSLHRFVLGVLLDDVLLQASQRLMKMSRGRYLLKRKEERAKGNVGSGL
DLMVEDSYSGKWRDVATLSGGESFMAALSLALGLSDVVQAYSGGIRLDTLFIDEGFGSLD
PESLDLAIQTLIDLQQGGRTIGIISHVTELKEQIGLRLDVLATRMGSTLRLIT
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgttaaaacttatcctccaagctttcggcccttttgttggacgagaagagatt
gactttacgaagttgggtgatgctccactgtttttgatcaatggggcaacgggagccgga
aaaagctcgattctggatgcgatttgctacgccttgtatggcgaaaccacgggcagtgag
cgtactggcgaccaaatgcgctgcgattatgcggatcctgagtctctcaccgaagtcagt
tttgagtttgagctggccggggcgcgttatcaaatcacccgtcagcccgatcaagagatc
ccgaaaaaacggggtgaagggatgacgaagaaatcccattccgctactttggttgcactg
aaagcggatggaaacgagctgattgccaacaagcccaatcctgtcgcgaaggcggtgatc
gaattgatgggacttgatgttaagcaatttcgccaagtcatggtgttgcctcaaggcaag
tttcgtgagcttttaaccgccaattcaaaagagcgtgagcagatttttggtcagctcttt
caaacccagctctacagccaaattgaacgggcgctgtttgagcgcgccgcgggtattcgt
aaagagaaagaagagtttgatcagcagatcaaaggtacgttaagtgtcgtcggactggaa
agtgaagagcagttacaaaccgagttgaccgaactggccccagtattaacccatgcgcaa
tcacaactcaaagctgagcaacagcagtgggatgaaacaaaagcgcactatcaagctgcg
cttgagttagaacaacaatttatccgcaagcagcaattggtggtagaaatcgccactcac
caagagcaggcttcgcacatcgaaatgctgcgccagcaacgccagcaagcccaaaaagca
gcgcgtttaaccgccgtccatcaacagtggcaccaagctcaaaaaaacctactgcaagct
aagcttaaggttgagcagcagcagactctgttgcaacaggcgaaagctcagcagcaacag
gctcaacaggtcagtcagcaagccagtttagcctgtgaagaagtaccaaaattaaacgag
caacgcatcacgtggcagcgtgctgagcaaaaattgctggcacaagaaaatgttcagcaa
gcggtggccaaggctgagcgtgaactgcaactggcgacacaaaatgcgcttaatttgcag
catgcgagcgaaaagctagagcaagagctacaaaaccaacgactcgaatgggaacagcaa
cagcgccaattaacgcgcttagaagttcaaaaagcgcgaatgaatcagttggtgcagcaa
gttcaggctcgcgagcgagaacaatccctactcaatgaattacaaactgctcaacaagct
ttattgcgctttgagcagcaacatcggcacatccaaactcaggccgaacaagcgaaactg
accgcggataaactggagtttgcatggcatacccagagggctgcggagcttgctcttgca
ctcacacaaaatgaaccttgtccggtatgcggcagtttagagcatcccaataaagcgcaa
tattcgggtgacgttgtcaccaaggttcaggttgaaaaagccagacagcagcaacaagat
tgggtgcagcgtcagcaagaggcattccatgcttggcagcaacaagggtttaaaaccgag
cagatagcgcaaaatctcacgactttatcgagtgagctaactttgcagcaagtggcgtta
ttgaacgagctcattgaacagcaacaaatactgcacagtgatattgctgcgctacaacag
cttaatcctgatttgctgaaacggcagattgaagagggggagcagcggttagcgcacacc
aaaatgacgctcgaaaaacagaatcaaaaccagcaacaagcttggcagactttggctcag
ttacaggcggaattggcaagtttgcgccaagaaatcccgccggagctgtccaatcttgat
actttacgaagcgcgatcgggcgtgtgcagaaccaaatagaaatcttacaaaaagcggaa
catacggctcgtgaacagtgggtgcaggcgcaaaagcagtttgccagtgtgcaggccgct
catcaggcggcgattgaagcgcaccgtgagtctcagcgtcagcaggaggaaaccacaagc
gcatggcagcaagggttactccattctggatttaacgatgagtccgcctatcttgccgct
cgtttaaccgatgaggctatcggcaatatcgagcgccaaatcgcccagtatgaagagcgc
agtgcgatgctcagtggcgaacagcaagccttatcacgtaaattagcagagaaaaatcgc
ccagagctggaaccacttcttgtcaaagtaactcaagctgaagaaaaaatggaactggcg
ttgcaggcgtttacgcaacatcaatcgcggatggatggattgcaacgtgtcgccaagcaa
ctggcggatctttaccagaaaaatcgtgcattagaagccgaatatcaggtcgtgggtacc
ttaagtgatattgcgaatggcaaaacgggcgctaaagtcagcttacatcgctttgtgctt
ggtgttttgctggatgatgtcttgttacaagcttctcaacgactgatgaaaatgagccga
ggccgctatttactcaaacgtaaagaggaacgcgctaaaggtaatgtaggctcagggctg
gatttgatggtcgaagatagctacagcggtaaatggcgtgatgtggcaaccttgtccggt
ggtgaatcgttcatggccgccttatcgcttgcgcttggtttatccgatgtggttcaggct
tacagtggtggtatccgtcttgatactctgtttattgatgaaggttttggtagtttggat
ccggaatctttagatttagcgatccaaaccctaatcgatcttcagcaaggtggtcgaacg
atagggatcatctctcatgttaccgagctgaaagagcagatcggtctaagattggatgtg
ttggcgacaagaatgggtagcacgctgcgtttaatcacataa
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