Vibrio crassostreae: IS519_00265
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Entry
IS519_00265 CDS
T08776
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vcra
Vibrio crassostreae
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcra03032
]
IS519_00265 (gyrA)
03400 DNA repair and recombination proteins [BR:
vcra03400
]
IS519_00265 (gyrA)
Enzymes [BR:
vcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IS519_00265 (gyrA)
DNA replication proteins [BR:
vcra03032
]
Prokaryotic type
DNA Topoisomerases
IS519_00265 (gyrA)
DNA repair and recombination proteins [BR:
vcra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IS519_00265 (gyrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
TPD52
Motif
Other DBs
NCBI-ProteinID:
UPR29755
LinkDB
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Position
1:55839..58499
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AA seq
886 aa
AA seq
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MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVVDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKV
YMRSKADIEVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNIKDMLKCFVDHRREV
VTRRTIFELKKARDRAHILEALSLALANIDEIIELIRNAPTPAEAKAGLVARGWDLGNVA
SMLERAGTDAARPDWLEDQYGIRDGQYFLTETQAQAILELRLHRLTGLEHEKILDEYKAL
LEEIAELMHILASTERLMEVIREELEAVREIYGDERRTEITAAVHDIDMEELIAQEDVVV
TLSNAGYVKYQILSDYESQRRGGKGKSATKMKDEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEEGERITAILPVSEFSNEKFIFMATGDGTVKKTSLD
QFANVRANGLIAVNLRDDDSLIGVDITNGDSDIMLFSKSGKVVRFNEDKVRAMGRTASGV
RGMKLPEDDQVVSLIVPSNEGDILTVTENGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDENVVGLQRIDE
VEEAEIVEGEAEEAGAEAINADVAESSEEQASDASDSESDSEQDTE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagcgaaagagatcacgcccgtaaatattgaagatgagcttagaggttca
tacctagactacgcgatgtccgtcatcgttggtcgtgcccttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttgttcgcgatgaatgtactaggtaatgattggaac
aaaccatataaaaagtctgctcgtgtagtaggtgatgtaatcggtaaataccacccgcat
ggtgatagtgctgtatacgatacaattgttcgtatggctcaaccgttctcactgcgttac
atgctagttgatggccaaggtaactttggttctatcgatggcgactccgcggctgcaatg
cgttataccgaagttcgtatggcgaaaattgctcacgagctactggctgaccttgataag
gaaactgtggattacgtaccgaactacgatggtacagaacaaattccagcagtacttcct
acaaaaattcctaacctattggtaaacggtgcttctggtatcgcagtaggtatggctacc
aacattccaccacataaccttggtgaagttgttgatggctgtttggcttacatcaataat
gaagagatcactattgatgagctaatggactacattcctggtcctgacttcccaacagca
gcacttatcagtggtcgtaaaggcatcgttgatgcttataagactggccgcggtaaggtt
tacatgcgttcaaaagcggatatcgaagtagagaagaatggtaaagaaaccattatcgtt
actgagatcccttaccaagtaaacaaagctcgtttgatcgagaaaattgctgaactggtt
aaagataagaaagtagaaggcatcagtgcactgcgtgacgaatctgataaagatggtatg
cgtattgttattgaatgtaagcgtgatgcagtaggcgaagtggttctaaacaacctatac
gctcaaactcaactgcaaacgactttcggtatcaacatggttgcgttgaacaacggtcaa
ccacagttgttcaacatcaaagacatgcttaagtgcttcgtagaccaccgtcgcgaagtt
gtgacacgtcgtactatcttcgaactgaagaaagcgcgtgatcgtgcacacatccttgaa
gcactgtctctagcacttgctaacatcgacgaaatcattgagcttatccgtaacgctcca
acaccagctgaagcaaaagctggcttagttgcacgcggttgggatcttggtaacgttgct
tcaatgcttgaacgtgctggtactgatgcggctcgtcctgattggttggaagaccaatac
ggcatccgcgatggccaatacttcctaacggaaacacaagcacaagctattctagaactt
cgtcttcaccgcctaactggccttgagcacgagaagattctagacgagtacaaagcactt
ctagaagaaatcgctgagctaatgcacattcttgcaagcactgagcgtttgatggaagtt
atccgtgaagaacttgaagcggtacgtgaaatctatggcgacgagcgtcgtacagaaatc
acagcggcagttcatgacatcgacatggaagagctgattgctcaagaagacgttgtagta
acgctttctaacgcaggttacgttaagtaccaaatcctaagcgactacgaatctcaacgt
cgtggtggtaaaggtaagagtgcaactaagatgaaagatgaggattacattgagcgtctg
cttgttgctaatactcacgataacatcctatgtttctctactcgtggtaagacataccgt
ctgaaagtttaccaactaccattagcaagtcgtactgctcgtggtaagcctatagttaac
attcttcctctagaagaaggtgaacgtatcacggctatcctgcctgtttctgagttctct
aacgagaaattcatcttcatggcaacgggtgacggtacagttaagaagacatcactggat
caattcgcaaacgtacgtgctaacggcctaatcgcagttaacctacgtgacgacgattca
ctgattggcgttgatatcactaacggtgatagcgacatcatgctgttctctaaatcgggc
aaagttgttcgctttaacgaggacaaagtacgtgcaatgggccgtactgcctctggtgtt
cgtggtatgaagcttccagaagacgatcaagtggtttcactgattgttccttctaacgaa
ggcgatattctaactgtgactgaaaacggttacggtaagcgtactgagctagctgaatac
ccaacgaaaggccgtgcaacgcaaggtgtagtatctatcaaagtctctgaacgtaatggc
ccagttgttggcgctgttcaagttgaagaaggcgatgaaatgatgatgatcaccgacgca
ggtacgctagtacgtactcgcgtagcggaagttagccaagttggtcgtaacactcaaggt
gtaacactgattcgtactgctgaagacgagaatgttgtaggtctacaacgtatcgacgaa
gtagaagaagctgagattgtagaaggcgaagctgaagaagctggtgctgaagctatcaac
gctgacgttgctgaatcaagtgaagagcaagcatcagatgcttctgactctgaaagtgat
agcgagcaagacactgagtaa
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